UFO04925.5prime Sequence
1106 bp (1006 high quality bases) assembled on 2009-06-30
> UFO04925.5prime
CAGTCGACATGCGAGCCTCCATTCCGCCCGGCATTCGAGTGGTGCGCGGA
CCCAACTGGATCTGGTCGAATCAAGACGACGGAGAAGGTCACGTTGGAAC
CGTTTGCGAAATCGGACGTTGCGGATCGACACATTCGCCAGAAAACACTG
TCGTGGTCAACTGGGATTCCGGACACCGGACCAACTACCGTGTGGGCTAC
CAAAACCAGTACGACTTGATAATTGTAGATAATGCTCAAGTTGGAGTTCG
TCACTCAAATGTTGTCTGCGATGGCTGTTCCAAGGCGGGTATCGCTGGCA
TAGTATTCAAGTGCGCCCAGTGTCCCAACTATCACCTATGCGCCTATTGC
TACGCAGAGGATCTGCACGATATTGAGCACCCGTTTATCCGCTACACGAC
TCCCAACTCGCTGGGCGTGAGATTGCCCATGAGAAAAGGTGCCAAGCGCA
TCCAGCTGCGAGGCATCTTTGTGGGTTCCAAAGTAGTGCGCGGTCCTGAC
TGGGAGTGGAACGAACAGGACGGCGGAGAAGGCAGGACGGGTCGGGTAAT
GGAAATCCGAGGCTGGGACAACGAATCGTGTCGCAGCGTGGCCAACGTAG
CGTGGGTAACCGGATCGACGAACGTCTACCGTCTAGGTCACAAGGGAAAC
GTTGACCTCAAGTACATTACTGCCACGTGCGGTGGTCACTACTATAAGGA
CCACATGCCTGTTCTAGGTCAGACAGAGGAGTTGCAGCCGGTGGCGCCCA
TGGTGAAGCCAAGCTTTTCCGTGGGCGACCGCGTCAAGGTTTGCCTAGAG
GTTGACGCCCTAATGAAATTGCAGCAGGCCATGGCGGATGGAATCCGCGC
ATGGTCGAGCATTGTCCAACTGGCACAGTACACCGCATCACGGACAGGGG
GATATACGTGTTCAGTATGAAACTGTCCCAATCGATGGAACTTTCATCCC
GCGCACTCGTTAAGTGTCTCTTTTCGTGTCGGTGACTGTCACATCATCAC
GATGCAACAAGTGCAGCAGCTGCAGACGTTCACGCGATGCATAGAATCAT
GCCACACGCCTTGCAAAATTTGCAAGTATGAAGGTACTTCGGACGGAACC
TCCGCA
UFO04925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mib2-RC | 3805 | CG17492-RC | 236..1359 | 8..1106 | 4865 | 97 | Plus |
| mib2-RB | 3899 | CG17492-RB | 398..1521 | 8..1106 | 4865 | 97 | Plus |
| mib2-RA | 4164 | CG17492-RA | 595..1718 | 8..1106 | 4865 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19038084..19038754 | 243..908 | 3110 | 99 | Plus |
| 2L | 23513712 | 2L | 19037802..19037972 | 74..244 | 855 | 100 | Plus |
| 2L | 23513712 | 2L | 19035798..19035865 | 8..75 | 340 | 100 | Plus |
| 2L | 23513712 | 2L | 19038815..19038897 | 908..986 | 235 | 94 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:29 has no hits.
UFO04925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:20 Download gff for
UFO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 512..1631 | 1..1096 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:41 Download gff for
UFO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 588..1707 | 1..1096 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:34 Download gff for
UFO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 588..1707 | 1..1096 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:34 Download gff for
UFO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19035791..19035865 | 1..75 | 96 | -> | Plus |
| 2L | 19037804..19037971 | 76..243 | 100 | -> | Plus |
| 2L | 19038085..19038754 | 244..908 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:41 Download gff for
UFO04925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19035791..19035865 | 1..75 | 96 | -> | Plus |
| arm_2L | 19037804..19037971 | 76..243 | 100 | -> | Plus |
| arm_2L | 19038085..19038754 | 244..908 | 99 | -> | Plus |
