UFO04934.5prime Sequence
976 bp (929 high quality bases) assembled on 2009-06-30
> UFO04934.5prime
CAGTCGACATGACGCAACAGCCACAATGGGGCATAAGCCTATCGAGGTAT
TTCGTGATACCCCAGCGAGTGATCCTGGCCATCATGGGCTTCTTGGCCAT
CCTGAATGCCTACACGATGCGCGTCTGTCTATCACAGGCCATCACGGTGC
TGGTGGTCAAGAAGAACTCAACGGATGACGATTCTGAGGCGATCTGCGAA
CCCGATGACATCGACGAGGGAACCAGTGTTGGTGGCGATTTCGAATGGTC
CGAGGAGCTGCAAGGTTTGATCCTGTCCTCATTCTACATCGGTTACATTG
TCACCCACATTCCCGGCGGTCTGCTGGCCGAGAAGTTCGGTGGCAAATGG
ACCCTGGGCCTTGGCATTCTGTCCACCGCCGTGTTCACCATGCTAACGCC
TTTGGCCATTAACAAGGGTGACTCCGACTGGCTGATTGTGACCCGAGTTC
TGATGGGTCTGGGCGAGGGAACCACCTTCCCCGCTTTGAGTGTCCTCCTA
GCTGCTTGGGTTCCGGCCAACGAACGTGGAAAGCTCGGTGCTCTGGTGCT
GGGTGGCGGTCAAGTGGGTACTATCATGGGCAACCTGTTGTCTGGCGTGT
TTATAGACGCCTATGGTTGGGAGTTTGTCTTCTACTTCTTCGGGGGTCTG
GGTGTTGTCTGGTTTGCCATCTTTTATGTTCCTCTGCTACAGCGATCCCA
CGTCGCATCCCTTCATCAAGCCCAGCGAGCGCGAGTATCTGGTCAAGGAT
ATTGGAAACCATTTAGCCGCACCGAGGACCTGCCCCCCACTCCCTGGAAG
GCCATCCTCACCAACCTGCCCATGTTTGCCCTGGATGACCGCCCATATTG
TTCACGATTGGGGCTTCTACATCATGGTGACGGATCTGCCGATTACATGG
GCCGACGTTCTTCAGTTCTCGATCAAGGGCTATGGTCTTTACTCCTCGCT
GCCAACGTCAAGATTGGCATCGGTTC
UFO04934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dmGlut-RA | 2426 | CG5304-RA | 341..1297 | 5..964 | 4455 | 98 | Plus |
CG9254-RA | 1684 | CG9254-RA | 211..356 | 21..166 | 280 | 79.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12032131..12032577 | 228..674 | 2235 | 100 | Plus |
2L | 23513712 | 2L | 12032646..12032920 | 676..953 | 1020 | 92.8 | Plus |
2L | 23513712 | 2L | 12031893..12032073 | 49..229 | 905 | 100 | Plus |
2L | 23513712 | 2L | 13596831..13596976 | 166..21 | 280 | 79.5 | Minus |
2L | 23513712 | 2L | 12027778..12027821 | 5..48 | 205 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:44 has no hits.
UFO04934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:44 Download gff for
UFO04934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)01810-RA | 333..1303 | 1..972 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:16 Download gff for
UFO04934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dmGlut-RA | 335..1305 | 1..972 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:21 Download gff for
UFO04934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dmGlut-RA | 335..1305 | 1..972 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:21 Download gff for
UFO04934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12031893..12032071 | 49..227 | 100 | -> | Plus |
2L | 12027772..12027821 | 1..48 | 92 | -> | Plus |
2L | 12032131..12032577 | 228..675 | 99 | -> | Plus |
2L | 12032646..12032940 | 676..972 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:16 Download gff for
UFO04934.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12031893..12032071 | 49..227 | 100 | -> | Plus |
arm_2L | 12027772..12027821 | 1..48 | 92 | -> | Plus |
arm_2L | 12032131..12032577 | 228..675 | 99 | -> | Plus |
arm_2L | 12032646..12032940 | 676..972 | 93 | | Plus |