Clone UFO04934 Report

Search the DGRC for UFO04934

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:49
Well:34
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptl(2)01810-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04934.5prime Sequence

976 bp (929 high quality bases) assembled on 2009-06-30

> UFO04934.5prime
CAGTCGACATGACGCAACAGCCACAATGGGGCATAAGCCTATCGAGGTAT
TTCGTGATACCCCAGCGAGTGATCCTGGCCATCATGGGCTTCTTGGCCAT
CCTGAATGCCTACACGATGCGCGTCTGTCTATCACAGGCCATCACGGTGC
TGGTGGTCAAGAAGAACTCAACGGATGACGATTCTGAGGCGATCTGCGAA
CCCGATGACATCGACGAGGGAACCAGTGTTGGTGGCGATTTCGAATGGTC
CGAGGAGCTGCAAGGTTTGATCCTGTCCTCATTCTACATCGGTTACATTG
TCACCCACATTCCCGGCGGTCTGCTGGCCGAGAAGTTCGGTGGCAAATGG
ACCCTGGGCCTTGGCATTCTGTCCACCGCCGTGTTCACCATGCTAACGCC
TTTGGCCATTAACAAGGGTGACTCCGACTGGCTGATTGTGACCCGAGTTC
TGATGGGTCTGGGCGAGGGAACCACCTTCCCCGCTTTGAGTGTCCTCCTA
GCTGCTTGGGTTCCGGCCAACGAACGTGGAAAGCTCGGTGCTCTGGTGCT
GGGTGGCGGTCAAGTGGGTACTATCATGGGCAACCTGTTGTCTGGCGTGT
TTATAGACGCCTATGGTTGGGAGTTTGTCTTCTACTTCTTCGGGGGTCTG
GGTGTTGTCTGGTTTGCCATCTTTTATGTTCCTCTGCTACAGCGATCCCA
CGTCGCATCCCTTCATCAAGCCCAGCGAGCGCGAGTATCTGGTCAAGGAT
ATTGGAAACCATTTAGCCGCACCGAGGACCTGCCCCCCACTCCCTGGAAG
GCCATCCTCACCAACCTGCCCATGTTTGCCCTGGATGACCGCCCATATTG
TTCACGATTGGGGCTTCTACATCATGGTGACGGATCTGCCGATTACATGG
GCCGACGTTCTTCAGTTCTCGATCAAGGGCTATGGTCTTTACTCCTCGCT
GCCAACGTCAAGATTGGCATCGGTTC

UFO04934.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-RA 2426 CG5304-RA 341..1297 5..964 4455 98 Plus
CG9254-RA 1684 CG9254-RA 211..356 21..166 280 79.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12032131..12032577 228..674 2235 100 Plus
2L 23513712 2L 12032646..12032920 676..953 1020 92.8 Plus
2L 23513712 2L 12031893..12032073 49..229 905 100 Plus
2L 23513712 2L 13596831..13596976 166..21 280 79.5 Minus
2L 23513712 2L 12027778..12027821 5..48 205 97.7 Plus
Blast to na_te.dros performed on 2014-11-28 19:37:44 has no hits.

UFO04934.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:44 Download gff for UFO04934.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)01810-RA 333..1303 1..972 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:16 Download gff for UFO04934.5prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 335..1305 1..972 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:21 Download gff for UFO04934.5prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 335..1305 1..972 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:21 Download gff for UFO04934.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12031893..12032071 49..227 100 -> Plus
2L 12027772..12027821 1..48 92 -> Plus
2L 12032131..12032577 228..675 99 -> Plus
2L 12032646..12032940 676..972 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:16 Download gff for UFO04934.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12031893..12032071 49..227 100 -> Plus
arm_2L 12027772..12027821 1..48 92 -> Plus
arm_2L 12032131..12032577 228..675 99 -> Plus
arm_2L 12032646..12032940 676..972 93   Plus