UFO04940.5prime Sequence
191 bp (122 high quality bases) assembled on 2009-06-30
> UFO04940.5prime
CAGTCGACATGAGCTACTTGCGATCGATAGAAATCTCACGCGTCGAAATG
TCGCCGGCTGACGATAATTCCTTTGCCACAACTCATGGAAACAAAAAGGC
CACCTACACGGTGATATGCATCAAGATTGTGGAACTGTGCCTGCTTATAT
GCTGTTTGGGCCGATCGACGAGCCGGCCAACAATTCTCTTC
UFO04940.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9628-RC | 890 | CG9628-RC | 173..353 | 9..188 | 850 | 98.3 | Plus |
CG9628-RB | 1053 | CG9628-RB | 145..325 | 9..188 | 850 | 98.3 | Plus |
CG9628-RA | 1125 | CG9628-RA | 239..397 | 31..188 | 740 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14627018..14627126 | 29..137 | 545 | 100 | Plus |
3L | 28110227 | 3L | 14627334..14627386 | 137..188 | 185 | 94.3 | Plus |
Blast to na_te.dros performed 2014-11-28 19:36:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib4 | 2656 | transib4 TRANSIB4 2656bp | 1981..2031 | 22..71 | 126 | 74.5 | Plus |
UFO04940.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:46 Download gff for
UFO04940.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RB | 126..316 | 1..191 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:16 Download gff for
UFO04940.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RB | 138..328 | 1..191 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:38 Download gff for
UFO04940.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RB | 138..328 | 1..191 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:38 Download gff for
UFO04940.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14627020..14627126 | 31..137 | 100 | -> | Plus |
3L | 14627335..14627389 | 138..191 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:16 Download gff for
UFO04940.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14620120..14620226 | 31..137 | 100 | -> | Plus |
arm_3L | 14620435..14620489 | 138..191 | 92 | | Plus |