UFO04945.5prime Sequence
1081 bp (969 high quality bases) assembled on 2009-06-30
> UFO04945.5prime
CAGTCGACATGTTTCGGTCGTGTGTGCCCAAGGCGATTACCTCTAGTCGC
TGTTTCGCGCGGATGTACTCGAAGGACGTGCGCTTTGGCTCCGGAGTACG
GGCAATGATGATCCGGGGCGTTGATATTCTGGCTGATGCCGTTGCTGTGA
CCATGGGGCCCAAGGGTCGCAGTGTGATCGTGGAGCGACCATGGACCTCG
CCGAAGATCACCAAGGACGGCTTCACGGTCGCGCGCTCGATTGCCCTAAA
GGACCAGCACATGAATCTGGGCGCCAAGTTGGTCCAGGATGTGGCCGATA
ATACGAATGAGTCGGCGGGTGACGGCACGACCACAGCAACAGTTTTGGCT
CGAGCGATTGCCAAGGAAGGATTCAATCAGATTACCATGGGGGCTAATCC
CGTGGAGATTCGTCGAGGTGTCATGTTAGCTGTTGACGTCGTAAAGGACA
AGCTGAAGGAAATGTCCAAGGCAGTGGAAACGCGTGAGGAGATCCAACAA
GTAGCCACCCTCTCCGCGAACGGGGATACTGAAATTGGGCGGCTCATTGG
TGAGGCCACCGACAAAGTGGGTCCAAGAGGAACTATTACTGTAAAGGATG
GCAAGCGCCTGAAGGACGAGCTAAATATTATCCAGGGCCTGCGCTTCGAC
AACGGCTATGTGTCGCCCTTTTTCGTAAACAGCTCCAAGGGGTCCAAGGT
GGAGTTTGCCAACGCCCTTGTAATGATATCCCTGAAGAAGATCACTGGAC
TCTCGCAAATAGTTAAAGGTCTGGAGCAATCCCTGAGGCAGCGTCGTCCC
CTGATCATCATAGCCGAGGACATCAGCGGGGAAGCCCTCAATGCTTTGGT
CCTGAACAAGCTCAGGTTGGGCCTCCAAGGTGTGCGCCGTCAAATCGCCC
CAGCTATGGACACCCACCCGCAAGGAGCTTATAGCGAAAATATTCCGCTG
CCACGGGAGCAACTATTTTTCGGCGATGACATCACTATTCCAAATGGAGG
AGGCTAGCTGGAGGATCTGGGTCAGCGGCGAGGCTGTGATATCAGGACGC
ACATGCTCTGCAGGCACCCAGAACAGGACCT
UFO04945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60B-RA | 2203 | CG2830-RA | 147..1206 | 9..1064 | 4850 | 98 | Plus |
| Hsp60-RB | 2328 | CG12101-RB | 193..579 | 72..458 | 615 | 77.3 | Plus |
| Hsp60-RA | 2357 | CG12101-RA | 222..608 | 72..458 | 615 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 728508..729538 | 9..1040 | 4615 | 98.4 | Plus |
| X | 23542271 | X | 11110110..11110496 | 72..458 | 615 | 77.3 | Plus |
| 2L | 23513712 | 2L | 5669058..5669388 | 100..430 | 425 | 75.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:56 has no hits.
UFO04945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:47 Download gff for
UFO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 88..1149 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:41 Download gff for
UFO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 138..1199 | 1..1058 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:36 Download gff for
UFO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 138..1199 | 1..1058 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:36 Download gff for
UFO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 728499..729560 | 1..1058 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:41 Download gff for
UFO04945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 728499..729560 | 1..1058 | 97 | | Plus |
