UFO04957.5prime Sequence
1107 bp (984 high quality bases) assembled on 2009-06-30
> UFO04957.5prime
CAGTCGACATGTCACTGCGTGCGCTTCGGAAAAGAGAAACAGGCACTGGC
TACGGCAACAATAACAACCATTTAGCAGCACCAGCAAGAACTTCACAAGC
AACGCTCTTTAAGAAGGCCAGCACAGCAATAACGTCACCGAAGAAATCGT
TGCTCAAAACTGGGAACTCCGTCTGCGGATTGGACAAACGGAGCCAGTTC
CGGGAGCAGAAGCTACTCGGTCGCAAGTGCCACTCGAGTCCTGACCTACG
ACAAATCGGAAAATACCAAAACAACAGCCTGTTGCGCAGCAAATCGGAGG
GGGATGTTAGTTTAATCCTGGCCAGTAACTCCGGTGCTCCATTGACGGTG
GCAAACGCCAAGTCAGAGGTTTGCCTGCAAAGGATTAGCTCTCACAGTTA
CGAACAATCTCCGAGAACGCCGATAAACAAAAGCGAAATGCTCGGCGGTG
CACGTTCCCATCGCGACCTGACGCAGTCGTCCTATGGCAACCAGGCAGGT
GGACATTCCGTGGATTTGGAATCCAGGTCTAGAACTCCTCGGCGGATGAG
CGAGTGCAGCTTGGGCTACAGCCAATCCAGCTCCCGGCACACTGGCTCCA
ACTCTATGTTCGCCAGCCAGATGACTCTCTCCTCGGGATCGGTGGTGCCG
CCCGTGGACCCCAACGCTGTGCTAAGGGTGCCCATTATTGGTTACGAGGT
TATGGAGGAACGTGCGCGTTTCACTGCCTACAAGCTGCGAGTCGAGAATC
CGGAGACCAACGACTATTGGCTTGTTATGCGACGCTACACCGACTTCGTG
CGGCTCAATAGCAAGCTAAAGCACGCTTTTCCCAACCTTACGCTCATGCT
GCCCCGGAAGAAGCTTTTCGGCGATACTTCAATGCCGTCTTTCTCGACAA
TCGGGTGCAAGGTCTGCAGATCTTCGTCAACTCAGTGATGGCCAAGAGGA
GCTGCGAAAGTGCAAACTGGGTTCGGGAGTTCTTCTGGCTGACGAGCGCT
CGTACTCTGAATCCATGGGAGGATGTCTTGCATTTCGAGCTCAGGAGGAG
AACATGAGCATCTGAGCTGCGATCGAAATAAACCGATCTCATCCAGTGCA
GCGGAAC
UFO04957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snx16-RA | 1699 | CG6410-RA | 124..1220 | 9..1092 | 4985 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17725741..17726724 | 991..9 | 4730 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:56:02 has no hits.
UFO04957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:14:03 Download gff for
UFO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6410-RA | 72..1152 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:44 Download gff for
UFO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snx16-RA | 119..1199 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:55 Download gff for
UFO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snx16-RA | 119..1199 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:55 Download gff for
UFO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17725701..17726728 | 1..1027 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:44 Download gff for
UFO04957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13613206..13614233 | 1..1027 | 98 | | Minus |
