UFO04960.5prime Sequence
1099 bp (1002 high quality bases) assembled on 2009-06-30
> UFO04960.5prime
CAGTCGACATGTTGACCACGATGAGAGGCAGCGCAAAGAAACTTCCCATC
TGGCCACTGACCCATTTTCGCAGATTCCCGACATTGATTAAATCCCACGC
AAGTTCCGAAGAAAAATTTGAGCAAAAAGCTGAGGAAGTGGACGGCGTAT
CCAATATGAAGCTACCCTACTTTATAAGCCCAAGGTGTGTTCAAAATCAG
GATCAACTGGTTGATGGGCAGACGAAAATGTTCACCTACAACTATCATCC
GTTTTCCATTTACGATTTAAATGAAGCTACTCTTCGCGCCAAGCAAGCAG
CAGATGAGTATTCAAAGAAAATTGATGAGTTGCAAAAGCGTAAGATTGAA
TATGTAAACAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCG
GCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACG
GGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAA
ACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTT
TAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATAT
ATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCCAGAGCGATGAAA
ACGTTTCAGTTTGCTCATGGAAAACCGTGTACAGGGTGACACTATCCCAT
ATCACAGCTCACCGTCTTTCATGCATACGAATTCCGATGACATCATCAAG
GCGGCAGAATGTGAATTAAGCGATAACTTGGCTATTTTCTACGGCTGAA
UFO04960.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-RB | 793 | CG16964-RB | 100..453 | 9..362 | 1770 | 100 | Plus |
| CG16964-RA | 589 | CG16964-RA | 76..429 | 9..362 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11948110..11948463 | 9..362 | 1770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:18:20 has no hits.
UFO04960.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:58 Download gff for
UFO04960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..434 | 9..370 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:03:26 Download gff for
UFO04960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..434 | 9..370 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:30 Download gff for
UFO04960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..434 | 9..370 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:30 Download gff for
UFO04960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11948103..11948463 | 2..362 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:03:26 Download gff for
UFO04960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11948103..11948463 | 2..362 | 98 | == | Plus |
