UFO04985.5prime Sequence
1077 bp (988 high quality bases) assembled on 2009-06-30
> UFO04985.5prime
CAGTCGACATGGGTTCTGGTGATGCAGAGAACGGCAAGAAGATATTTGTG
CAGAAGTGCGCCCAGTGCCACACCTACGAAGTGGGCGGCAAACACAAGGT
GGGCCCAAATCTTGGCGGGGTCGTGGGTCGCAAGTGTGGCACAGCAGCGG
GATACAAGTATACCGATGCCAATATAAAGAAGGGCGTTACCTGGACAGAG
GGGAATTTGGACGAGTACCTCAAGGACCCGAAGAAATACATTCCCGGAAC
AAAGATGGTGTTCGCAGGTCTTAAAAAGGCTGAGGAGCGGGCCGATTTGA
TTGCCTTCCTCAAGTCAAACAAGGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA
AAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTC
AATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCCGGAATCGTCGTGGTATTCACTC
CAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGTGTACAGGGTG
ACACTATCCATATCACAGCTCACGTCTTCATGCATACGAACTCGATGACC
ATCATCAGGCGGCAGATGTGATAAGCGATAACCTTGTGCCTATTTTCCTT
ACCGTCTGAAGCGTATATCAGCTGACG
UFO04985.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyt-c-d-RB | 767 | CG13263-RB | 267..581 | 9..323 | 1575 | 100 | Plus |
| Cyt-c-d-RA | 837 | CG13263-RA | 337..651 | 9..323 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16719135..16719449 | 9..323 | 1575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:25 has no hits.
UFO04985.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:14:15 Download gff for
UFO04985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-d-RA | 370..684 | 9..323 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:50 Download gff for
UFO04985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-d-RA | 337..651 | 9..323 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:25 Download gff for
UFO04985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-c-d-RA | 337..651 | 9..323 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:25 Download gff for
UFO04985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16719135..16719449 | 9..323 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:50 Download gff for
UFO04985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16719135..16719449 | 9..323 | 100 | == | Plus |
