UFO04986.5prime Sequence
1145 bp (1041 high quality bases) assembled on 2009-06-30
> UFO04986.5prime
CAGTCGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGGCCTCGCTG
GCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATCAGCCGACC
ATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCACGCGTCTGT
TCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGGTGGCATGT
TTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTGTACAGTGC
CAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAAGGGTATCG
ATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCATCCGAAAGA
GTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACCCTCGAATC
CTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTCCACATACA
GCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGGAACGCTAC
CGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCGGAGCGGCA
CTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGCCTGTCTGG
ATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCACGACCTCC
ACATCGACCACCACCACCACCACTACCACGACCACCGAGGCACCCACCGA
ACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCAGTTCAAGC
AGCTTTTGAATTTGTTAAACGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGTCATTACTGGATCTTATCACAGGAGTCTAGCGAGCTCGATATCA
AATTACGCCCCGCCTGCCACTCATCGCAGTACTGTTGTAATCATAAGCAT
TCTGCGACTGAGCCATCACAAACGCATGATGACTGATTCGCAGGCGCATC
AGCCCTGGTCGCTTGCTTAAATTTGGCATGGTAACGGGGGCCAAA
UFO04986.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16762-RA | 885 | CG16762-RA | 21..782 | 9..770 | 3810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2475180..2475594 | 423..9 | 2075 | 100 | Minus |
| 3L | 28110227 | 3L | 2474770..2475118 | 770..422 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:38:02 has no hits.
UFO04986.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:14:16 Download gff for
UFO04986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 1..765 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:28 Download gff for
UFO04986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 16..785 | 1..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:32 Download gff for
UFO04986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 16..785 | 1..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:32 Download gff for
UFO04986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2474767..2475117 | 423..774 | 99 | <- | Minus |
| 3L | 2475181..2475599 | 1..422 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:28 Download gff for
UFO04986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2474767..2475117 | 423..774 | 99 | <- | Minus |
| arm_3L | 2475181..2475599 | 1..422 | 99 | | Minus |
