UFO04991.5prime Sequence
1131 bp (1035 high quality bases) assembled on 2009-06-30
> UFO04991.5prime
CAGTCGACATGGCCATCGCTCTGGACTGGCTTCTCCTGATTACCCTGGCC
AGTGGATCCCTGGCACTGTGGTCTCCTCAGTTGGTGCCTCCAACTGTTGG
TCTGTTGGCGCCGGGCCCGCCAGCTACCTTGGCTCCACCACCCACTCTAT
CCCAGGATCTGGAAGAAATCCAGCGTCTGATACAGTCGAAGCCATTAAAC
CAGCTCTTGGTGCGCTACCTAATCAACGATGCCCAGTTCCAGGCCTTCGT
GCGGATTATCAACAGCAATGCCGCAGTCACTGCCCGCTGGCGTCTGCTCT
CGCAGCCGGAGCTCATTCTCTTTCTGCAGTGGACGGACCAGCAGCTCCTG
GCCTCGGGCGGTTCCTTTGAGTTGGAGGAGCAGAGGCTCAAAGTGAGTCT
ATTGAACCAGTTTCCCTACTGGTCCGGCACCGTTTTCGGCTGGCAAGGAT
TTCTAAACGAAGTTCAGCTCTACTTTCCACTGTATGCCATCCGAGCCCAC
ATCGATGCCAAGGTGTTGCAGCAGGGAATTTTCGCCCAGTTCTGGTCGAG
ATTACAGGGGTTGCGAGTCATGTATGAACGTTGGCTGACTACAGTGGAAA
CTACACAGGTTCTGGCTGAACTTCAGAAGGCGGGCATTGATACCGTGCAA
TTGGATGGCATCATCCGAGAGCTCCTCGGCTGGAATGCTGTGAATGGTAC
GGTAGAAGCCTCCACTGGTGGAACTCCCGCTGCACCTACCGCGATTCCGG
GTGCAGTTTTGCCCCCAGTTAACACTGTTAGTGTGGTTGTCGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGAGATCCTGGTTCATGAC
TAGTGCTTGGATTTTCACCAATTAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAATCCAGATGGAGTTCTTGGAGGTCATTACTGATTTTATCAACA
GGAGTCCAAGCGAGCTCGAAATTCAAATTACGCCCCGCCCTGCCACTCTC
ATTCGCGAAGTTCTTGTTTTTTATTCATTAGCATTCTGGCCGACTTGAGC
CAATCAAAAACGGCATGATGTGACTGAATCG
UFO04991.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-RA | 932 | CG14963-RA | 5..787 | 9..791 | 3915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3171759..3172541 | 791..9 | 3915 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:52 has no hits.
UFO04991.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:39 Download gff for
UFO04991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 2..793 | 6..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:20 Download gff for
UFO04991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 2..793 | 6..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:39 Download gff for
UFO04991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 2..793 | 6..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:39 Download gff for
UFO04991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3171753..3172546 | 1..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:20 Download gff for
UFO04991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3171753..3172546 | 1..798 | 99 | | Minus |
