UFO04995.5prime Sequence
1115 bp (1010 high quality bases) assembled on 2009-06-30
> UFO04995.5prime
CAGTCGACATGGAGGCGAAAATGAATTTACATGTGTGCGCCTTAGCGCTG
CTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGACCTGGT
AGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGAGAAGC
CACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGACGCCG
CCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTTTGCGA
GATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCACCTGC
CCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAGAGGCG
CCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCACGTGCT
GAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAAGACCA
TCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGACGCCG
GAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACCGAGAA
GACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCGCGTGC
ACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACAAGGAG
ATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTTCTGAT
CTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGCCCGCA
ACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTACTTAAT
GAGGAAGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCCCCACCAATAAAAAACG
CCCGGCGGCAACCGGAGCGGTTCTGAACAAATCCAGATGGGAGTTCTGAA
GGTCATTACTGGATTTTATCACAGGAGGTCCAAGCGAGCCCCGATATCAA
ATTACGCCCCCGCCCTGCCACTCTCATTCGCAGATACTGTTGTAAATCCA
TAGCATTCTTGCCCG
UFO04995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RC | 989 | CG15009-RC | 59..859 | 9..809 | 4005 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1521 | 17..809 | 3965 | 100 | Plus |
| ImpL2-RB | 1651 | CG15009-RB | 729..1521 | 17..809 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225707 | 797..17 | 3905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:54:22 has no hits.
UFO04995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:14:14 Download gff for
UFO04995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 9..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:14 Download gff for
UFO04995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 9..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:23 Download gff for
UFO04995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 9..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:23 Download gff for
UFO04995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224922..4225711 | 10..803 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:14 Download gff for
UFO04995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224922..4225711 | 10..803 | 99 | | Minus |
