UFO05001.5prime Sequence
941 bp (-81 high quality bases) assembled on 2009-06-30
> UFO05001.5prime
CAGTCGACATGGAGCAGAAAACAACAAAATCTTCAAGCATTACCCAGGTT
GATATTCTGGTGACTGGATCCAGATAGATTGGTCCCAGTGATGAGTTGGG
CATGCACGAGATGGGTGTCTACATTTATCCGGATGGGACATGCTACTCGG
GAGAGTTTCTCAACGATCGTTTCCACGGAAAAGGCACCATACCAATTCCT
GATTCCTTGGGCGTTACCTATCAAGTAACCCATCACAATGGCAGACTGGT
CTCGATCGCTCAGGTTAACTTCAATGATAGTCTGCCCGTCGACTTTGAGA
TGAAGGATCATTACACGATGAGTTTCATACCCTGGACGTATTGCACGCCG
GAGGATCGCCGATTCTACCAGGAAACCAAGGAGCCTATGGATGCCGTCGG
TCCGAATAAGTTCCCGTCCAAGGACGGACCAAATCCGCTCAACCTGGGTC
GCAATATTTTCGATCTGGGCTTCGGACTGCTGGGCAATCGTGGCTTCATG
TTGGATACAAAGACGTTTAGCAACCATAGTATATATCTAGGATGTCGGGG
AGGCTCGTCCCTGGATCCGAGAGAACTGTGCCCATGGACCACTCAGCAAG
CGTCACCACAAACAGAAGTTATTGGCCCCGTTTTTGCCCGTGAGATCATC
CGGAACAATCAAGAAATGCAGGCTGCACCCCAAAGGGAGTTCATGACCAA
ATCCATCCTTGTAAGCACTCCACCAGCTTGGATAGCTTCGCTTCAGAGCG
TCTCCATCTGGGCCGCACTACGAATTCCACGACGTTCTGAGGCTCAGCCA
TGGTTTGCGTCTTGAGAAGTTCCATGGCAATTGGACAAGAACCAAAATCG
AGATAGCGTGTGGTCGTATCAACGCAAGCTTTTTAGACATTCCTTTTGGC
CTGCCGGCCCCAGTTAGTTGGTCCATACTCTTAATCTTAGT
UFO05001.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3306-RA | 1026 | CG3306-RA | 73..937 | 8..873 | 3660 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9601595..9602439 | 8..853 | 3430 | 95.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:08:59 has no hits.
UFO05001.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:15:32 Download gff for
UFO05001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3306-RA | 73..917 | 8..853 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:03 Download gff for
UFO05001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3306-RA | 73..917 | 8..853 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:10 Download gff for
UFO05001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3306-RA | 73..917 | 8..853 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:10 Download gff for
UFO05001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9601595..9602426 | 8..840 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:03 Download gff for
UFO05001.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9594695..9595526 | 8..840 | 96 | == | Plus |
