UFO05006.5prime Sequence
1123 bp (1011 high quality bases) assembled on 2009-06-30
> UFO05006.5prime
CAGTCGACATGGCATCCCTGTTCGGAGATGATGGTGTGGATGACCTATTC
AATGACAACATTCCGACTGACCCGGATCAGCTGCCCAGCGATGGCGAAGG
CGAAAAGCTGTTTGCGGACGACGAGGACAACGGCGTAGAACCTGGTAGCC
AGGATGCCCAGATAGTGGAGCCTAAGAAGCGAGCTGTGAGAAATCCCCGA
CCGCGACTCACTGTGGAAACACTTCGAGGTCCTCGTGGCATCCAGACCAT
CGAAGATTATTTTAAGGACATCAAATTCAAGGGCAAGGGTTACGAGAAAA
CCGATCTCGACGAGGTGCTTCGCCGCCTGCAGCACTGGGGCCATCGTATG
TATCCCACCTACACCTTTGACGATGTGCTTAACAATATCGAACGGCTGGG
CAAGAAGAAACCCCTCCAAGTGCACATGGCGCGATATCGACTCGGTCAGC
TGGAGCAGATGCGCGCCCACGAAGCGGAGGCCCTGGAGGAGGCGCAGGAT
GAGCAACAGGAAGGTGCCGGCGATGAACCCTTTGATGAGTTCGACGCCCT
GCTAGGTGAACAGATTGCCATGTCCAGGCTGGCGCCTCCCAGCCCGCAGC
AGTGGAAAATGTCTACTGCTTCCAGTAACAGCACGCTGGCTACTCCGTCA
TTCTCCCGCGGCAATGCTGTAATGTCCACGCCGTACTCCGGTGTAAATGC
GACCTTCGACAGAAGTGGAGCTTCTGTGGCTCCGGCCTTCGATCGGAATG
GAGCTCCGTTGGCATCGATGGACATCAGCGACTATGGTCAGCCGCTGCCT
CCCTCACAGCCTCCCACGCCGGCGGCTAAGAATTATCCAACGAACAGATG
GCCAGGATTGCGGAAAACCGCAGCTGGCGCAGAGCGACTTAAGGCCAAGC
AGCAGCAGGAGAGCGGAAGTAAAAGTGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAGTGGTCATATCATATCATATCATATCATATCC
CCACCTAGCCTAAGGAGATCCTGTCATGACTGTGCTTGATTCCCACCAAT
AAAAACGCCGGCGGCCACCGAGCGTTCTGAACAATCCGATGGAGTTCTGA
GTCATACTGGATTCTTTCACGGA
UFO05006.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10336-RC | 1313 | CG10336-RC | 201..1121 | 9..926 | 4530 | 99.7 | Plus |
| CG10336-RA | 1216 | CG10336-RA | 104..1024 | 9..926 | 4530 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18689794..18690714 | 9..926 | 4455 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:17 has no hits.
UFO05006.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:15:39 Download gff for
UFO05006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10336-RC | 145..1068 | 4..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:31 Download gff for
UFO05006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10336-RA | 101..1024 | 4..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:45 Download gff for
UFO05006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10336-RA | 101..1024 | 4..926 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:45 Download gff for
UFO05006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18689791..18690714 | 4..926 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:31 Download gff for
UFO05006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18689791..18690714 | 4..926 | 99 | == | Plus |
