Clone UFO05010 Report

Search the DGRC for UFO05010

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:50
Well:10
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG12860-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05010.5prime Sequence

715 bp (116 high quality bases) assembled on 2009-06-30

> UFO05010.5prime
CAATCCACATGTTTCTGGCCAAAAGTTCATCAATACTTCGCCCGCAGCTT
CTTAATGAGGTGAAGGGACTAGTGAAGTCACAATTTCTGGCTCTGTCACA
GGTCCACCGACGCTTTGCCCACTCGGACGATAGGTGCGCCAATATTAAAT
CCAGGAAGTGCCATCACAGCCCACCCAATGGTGTGTGTTTGCCCCCCCGG
GATCTAAGACATTCTCATACGGATGGCGTCAGTGATAAGTGCGCGAAGAA
CAAAAAAGATAAGCGGGAGTGCAAGAAGTTTGAGTCCGAAAATGCCAAAA
AGCCGGAATGCAAACCGCCCGTTGTCCGTGCTCCAAAATACTACAAGCAG
CTAAAACCGTGCAAGACCGACAAGGAGCTCTCCGAGCTGCATCCCAGGTA
TCTGGGTGTATGGGGTCGTTGCGACTTACCCTACAAGCCAGATCCCGATT
GCACCGATCCCTGTGATTTGGCCGTACGTTTGGATGACAAGTACTACAAG
CCCAGCATATCGCTGGACCGCGAATTCGACCAGTACTGGGGTGGAGTGCT
TCTTCCGGAAGCATAAACGCTGCTGCCGCAAGGTTGCTCCTGAGCGCACT
TACCGCGTGTTACCAAAAGTGCGTTTCCGCTCCGAAGATGCGCGTTGCTT
CATAGTCAATCCTCATGCCATGCAAACTATGAGGCCAAAAACGAACACCT
GTCCCAGATCAAGCT

UFO05010.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG12860-RA 1177 CG12860-RA 127..833 9..715 2995 95.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14666022..14666691 677..9 2830 96.1 Minus
Blast to na_te.dros performed on 2014-11-28 20:56:11 has no hits.

UFO05010.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:15:21 Download gff for UFO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12860-RA 127..808 9..690 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:51 Download gff for UFO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12860-RA 127..808 9..690 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:01 Download gff for UFO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12860-RA 127..808 9..690 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:01 Download gff for UFO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14666010..14666691 9..690 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:51 Download gff for UFO05010.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10553515..10554196 9..690 96   Minus