Clone UFO05023 Report

Search the DGRC for UFO05023

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:50
Well:23
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05023.5prime Sequence

1090 bp (975 high quality bases) assembled on 2009-06-30

> UFO05023.5prime
CAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGGGATGTGAA
ACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTATATATATA
TATATATATATATACATATCTGTATATAGATTTATATGTGTGTGGGGAAG
AAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTCAAAATGTA
GCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGGCATGGGTA
TGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCATTATAGGAT
TTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTCGCAAGAAA
TGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGATTTCCTGT
GAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCCATTCGGTT
TCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTGATTCTGTT
TCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTTAAACATAC
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAACGGGGCGAAAAGTGT
CCATATTGGCCACGTTAATCAAACTGTGAACTCACCAGGGATTGGCTGAA
CGAAAAACTATTTCTCAATAACCTTAGGAAATAGGCAGCTTCACGTACAC
GCCCCATCTGCCAATTATTGGTTAAACTGCGATCTCTGAT

UFO05023.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:37:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10528421..10528963 551..9 2715 100 Minus
Blast to na_te.dros performed 2014-11-28 19:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
transib2 2844 transib2 TRANSIB2 2844bp 2529..2568 471..510 119 77.5 Plus

UFO05023.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:14 Download gff for UFO05023.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528411..10528969 1..559 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:14 Download gff for UFO05023.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528411..10528969 1..559 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:06 Download gff for UFO05023.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354133..6354691 1..559 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:06 Download gff for UFO05023.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354133..6354691 1..559 98   Minus