UFO05023.5prime Sequence
1090 bp (975 high quality bases) assembled on 2009-06-30
> UFO05023.5prime
CAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGGGATGTGAA
ACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTATATATATA
TATATATATATATACATATCTGTATATAGATTTATATGTGTGTGGGGAAG
AAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTCAAAATGTA
GCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGGCATGGGTA
TGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCATTATAGGAT
TTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTCGCAAGAAA
TGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGATTTCCTGT
GAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCCATTCGGTT
TCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTGATTCTGTT
TCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTTAAACATAC
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAACGGGGCGAAAAGTGT
CCATATTGGCCACGTTAATCAAACTGTGAACTCACCAGGGATTGGCTGAA
CGAAAAACTATTTCTCAATAACCTTAGGAAATAGGCAGCTTCACGTACAC
GCCCCATCTGCCAATTATTGGTTAAACTGCGATCTCTGAT
UFO05023.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:37:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10528421..10528963 | 551..9 | 2715 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2529..2568 | 471..510 | 119 | 77.5 | Plus |
UFO05023.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:14 Download gff for
UFO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528411..10528969 | 1..559 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:14 Download gff for
UFO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528411..10528969 | 1..559 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:06 Download gff for
UFO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354133..6354691 | 1..559 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:06 Download gff for
UFO05023.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354133..6354691 | 1..559 | 98 | | Minus |