UFO05029.5prime Sequence
994 bp (296 high quality bases) assembled on 2009-06-30
> UFO05029.5prime
CAGTCGACATGATTGACGCGGCTTCCGCCGAGCGGGCAAGCCCCCAGTTT
ATTGCCCTCTTCAGTGACAATCTGAAACTGGGCCACGAGGACCACGGCCC
ACTTGCAGTCAATGGAAAGGACGCCCACCATCACGTACCCGCCGACCTGG
AGGCGACCTATGGAACCTTGTACGCCGCCTGCCAGGATCACGCCGCCTTC
TTTGCCCGGGACCACACCGAATTCGGCCAGCGCCTGCATGCCGCCCACAT
TGCCTGGCAGGACTTCATTGTCTTGGCCAACCGACTGGTCCAGCAGATCG
ATGCCTTCGCCCACGAGTACGATTTTGACGAGCAGACGCCGGGCAATGGA
TACAGGAGCTTCATCTACGTGACCAACGCCTGCATCGCGCATGGCATTAG
CATCTGCCAGCAGCTGACAGCCACCCGTTCCACCATATTCTTCCGCAAGA
AGTTCTACATGAAGGAGGTTGAGGCCTGTTCCCAGCTGTTGTCGTCGCTG
TGCACATGTCTGCAATACCTGCTGATCCTTCGCCAGTGGTCGGCTAGCAC
GGGTGATCTGTTCGCATGCGGAAATCACACTGCCGAGCAGCTCTTCGAGC
TGGGCGACACCATCAACCAGTATTGCTTTTACGGACGCTGCCTGGGCTTT
CAGTATGGCGACTCGATACGCGGAGTTCTCCGATTCCTCGGCATCAGCGT
GGCCAGCTACTCGGAGTCGTACTATTCGCAAGAGGGCGACGGCCCCATCG
TTAAGACCACACGCAGCCTGTGGACATCGGCAAGTATCTTATGAATCCGG
AACTGCGCGCCCGTCGCATCGTTAACATCTCGCAGAATGCTGAGATAGAC
TTTTGCAAATCCTTTTGTTTCTGGCCGAGTCCGAGATGAAGCACAAGCTG
CCCAGCATTGTGGCAGCTCCATTAAGTTAATCCGCTCATCGAATGCCAGC
CTAGCGCTAAACTGCCTCGCCGAAAAATTCAGGCTCGACAGTCT
UFO05029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsl-RC | 3613 | CG11055-RC | 201..1174 | 9..975 | 4485 | 97.8 | Plus |
| Hsl-RA | 3554 | CG11055-RA | 142..1115 | 9..975 | 4485 | 97.8 | Plus |
| Hsl-RB | 3522 | CG11055-RB | 110..1083 | 9..975 | 4485 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20258193..20259166 | 9..975 | 4310 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:29 has no hits.
UFO05029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:12 Download gff for
UFO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11055-RC | 192..1194 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:07 Download gff for
UFO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsl-RB | 106..1103 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:56 Download gff for
UFO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsl-RB | 106..1103 | 1..990 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:56 Download gff for
UFO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20258184..20259186 | 1..990 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:07 Download gff for
UFO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16145689..16146691 | 1..990 | 97 | | Plus |
