UFO05032.5prime Sequence
1115 bp (1007 high quality bases) assembled on 2009-06-30
> UFO05032.5prime
CAGTCGACATGGCTTGTACATGCGAAGTTATTGGACTGGCCTGCGTGGTG
GCTTTAATCCTAAGCGCCACGGCCAAGGCTCCCTATCAGATGCGCATGTT
CTTTATATTTTTTGGAGCTGGTCTGATAGTCTTTCTGTGCGTGCCCTTTA
TGATTCTGCGACCGCGAGACTATCGAAATGCGCTTTTTCCATCATGGTGC
TTCCGGCAGCTTTGCCGCCTGGTGGGCATAACAATGGAGGTTCGTGGTCT
GGAGAATGTCCGTAAGGACCATGGGGCAGTGGTGATAATGAACCACCAAA
GTGCTGTTGATCTTTGCGTTCTGGCCTATTTGTGGCCTGTGATCGGAAGA
GCAACAGTTGTCTCCAAGAAGGAGGTTCTCTACATCCCATTCTTTGGCAT
TGGAGCATGGCTCTGGGGTACCCTATACATCGACCGCTCCCGCAAGACCG
ACTCGATCAACTCTCTGCAAAAGGAGGCGAAGGCGATACAGGAGCGCAAC
TGCAAGCTACTGCTCTTCCCTGAGGGAACGCGCAACTCCAAGGACTCGTT
GCTGCCCTTCAAGAAGGGCTCATTCCACATCGCACTGCAGGGCAAGAGCC
CCGTTCAGCCGGTGGTCATATCGAAGTACTCATTCATGGATGACGAGAAA
AAGACATTCCGTCCTGGCCACGCCCTAATCCACATCCTACCCGAGGTGTC
CACCGAGAAGTACAAGAGGGAGGACGTGCAGCTGCTGATCGACGAATGCC
AGTCCATCATGCAGACGGAGTACACAAAGCTGAGCAAAGAAGCCAAGCCT
TGAGCTCAAAGAAGCACGCAGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAA
AAAACGCCCGGCGCACCGAGCGTTCTGAACAATCCAGATGAGTTCTGAGT
CATTACTGATCTATCACAGGAGTCAGCGAGCTCGATATCAATTAGTCGCT
GCATCTATCGAGTACTGTTGTATTCATAGCATTCTGCGACTGAGCATCCA
CGCATGTTGACTGAA
UFO05032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fu12-RC | 2065 | CG17608-RC | 852..1664 | 9..820 | 4025 | 99.8 | Plus |
| fu12-RD | 1311 | CG17608-RD | 98..910 | 9..820 | 4025 | 99.8 | Plus |
| fu12-RB | 1335 | CG17608-RB | 122..934 | 9..820 | 4025 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8450092..8450728 | 820..185 | 3120 | 99.7 | Minus |
| 2L | 23513712 | 2L | 8450794..8450969 | 184..9 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:56:54 has no hits.
UFO05032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:13 Download gff for
UFO05032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 9..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:22 Download gff for
UFO05032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 9..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:29 Download gff for
UFO05032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu12-RB | 122..934 | 9..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:29 Download gff for
UFO05032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8450092..8450728 | 185..820 | 99 | <- | Minus |
| 2L | 8450794..8450969 | 9..184 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:22 Download gff for
UFO05032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8450092..8450728 | 185..820 | 99 | <- | Minus |
| arm_2L | 8450794..8450969 | 9..184 | 100 | | Minus |
