UFO05037.5prime Sequence
1064 bp (998 high quality bases) assembled on 2009-06-30
> UFO05037.5prime
CAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGGCGGCTCTC
TGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGCCGAGTTCT
CAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGACAACAAGG
AAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCCAGGAGCAG
GAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTTGCCGAGGG
CAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAAGGACACCA
TCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCGTTCGTGCC
GGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGTCGTCGTAG
TGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACGCAGGCGCG
GTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCGTGAAGAGG
CGTTCCGGCAAGGGCAACAAGGCCGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCA
TGTGAAACGGGGCGAGAGTTGTCCATATTGCCACGTTTAATCAAACTGGT
GAACTCACCCAGGATGCTGAGACGAAAACATATTTCTCAATAACCCTTTA
GATAGCAGTTTCACGTTACACGCAATCTGCAATAATGTGTAGAACTGCGA
TCGGCTGCAATTCA
UFO05037.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31813-RB | 893 | CG31813-RB | 52..571 | 5..524 | 2585 | 99.8 | Plus |
| CG31813-RA | 653 | CG31813-RA | 52..571 | 5..524 | 2585 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13736189..13736708 | 5..524 | 2585 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 21:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 162..117 | 113 | 71.7 | Minus |
UFO05037.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:16 Download gff for
UFO05037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 47..573 | 1..529 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:04:03 Download gff for
UFO05037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 49..575 | 1..529 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:59 Download gff for
UFO05037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 49..575 | 1..529 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:59 Download gff for
UFO05037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13736186..13736714 | 1..529 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:04:03 Download gff for
UFO05037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13736186..13736714 | 1..529 | 98 | -> | Plus |
