UFO05048.5prime Sequence
1099 bp (952 high quality bases) assembled on 2009-06-30
> UFO05048.5prime
CAGTCGACATGTGCCGGCGACTAAGAAATATCCCCGGACTGATCTGCCTG
CTGACGACGGTCGTCGTGCCCTGTCGGACGGAGTTCTACGCTCTAGACGC
GCTGGGGCGGGATCCGAGTCCCGCTGATTTTCCGGGTGCAGTGCCACGAC
TGGTTATCTACAACCCCTTTAGTGGCCAACAGCTGGAGCCGCTGCGGTAC
TCGGCTGTTTCGCGGGGCAGACGGCAGCCCGTGAACGGTAACATCGTAGA
GCTACCCCAGCTCTGGCAGCCCTGCTCCTGCGTCGAGTTCTCTTGCCGGT
GCTGCCTTGGCCTGGCTCTGGGACTCGGCGAATCAGCCAACCAGCGGTTG
TGCGCCGCCCTCGACTACACCCGGGCGGATCTAGGTCTGCGCCTCAGCGT
CGAGATAAACCAGCGCAAGGTGGCAACCTTCGGGTTCTCGACTCGAAATC
CGCCCGAATACTGCGTGCCGCTGCCGCTCTCCAGCTGCCTCAGACTCTAC
GACATCCGTGCGTTCGGCGAGGGCAACATGCAGATATGTCTGTCGGTGGT
CTTTAAAGTTCTGGCCAGCCAGTTCTTCGAGTACCGCTTCAGCTGCCTGC
GCTTTGGCGCCAGAGGAGTATTCTTCGTTCGCGACGCACTGCAGGATCAG
GGGCAGGATCAGGAAGCACTGGAGGTGGGGTCTAGGTCCGATGCGTGGCA
GTATACGCCAAAGAAGCTGGCTGACAGGAGCATCTTCAGTTTCTACGGCA
GAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCCCCAATAAAAAAACGCCCGGCGG
CAACCGGAGCGGTTCTGAACAAATCCAGGATGGGAGTTCTGGGTCATTAC
TGGATCTATCACAGGAGTCCAAGCGAGCTCGATATTCAAATACGCCCCGC
CCTGCACTCATCGCAGTACTGTTGTAGTCATAGCATCTGCGACATGCAGC
ATCCAACCGCATGATGAACTGATCGCCACGGCATCAGCACCTTGTCGCT
UFO05048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31516-RA | 1668 | CG31516-RA | 434..1178 | 8..752 | 3725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4218953..4219697 | 752..8 | 3725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:17:34 has no hits.
UFO05048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:15 Download gff for
UFO05048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 427..1185 | 1..760 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:11 Download gff for
UFO05048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 427..1185 | 1..760 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:00 Download gff for
UFO05048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31516-RA | 427..1185 | 1..760 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:00 Download gff for
UFO05048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4218946..4219700 | 1..760 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:11 Download gff for
UFO05048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 44668..45422 | 1..760 | 98 | | Minus |
