Clone UFO05057 Report

Search the DGRC for UFO05057

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:50
Well:57
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptstai-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05057.5prime Sequence

1111 bp (982 high quality bases) assembled on 2009-06-30

> UFO05057.5prime
CAGTCGACATGGTGAACAACACTGTTGATACTGAAGCCACAGAGATTCGC
TGCCAGGAGAAGTCCCGCGGGGGATTGAGCTATGAGGTCATCCTGGCCGA
ACCGGCACCCAATGTGGCCGTTCCAAAACGACCGGTCACCCCTGGCAAGA
ACGTTAGCGTCGAGGAGATTGAGCAGAAACTTAAGGCGGCCGAGGAACGT
CGCATTTCTCTAGAAGCCAAGAAGATGGCTGACATCTCCACTAAGCTGGC
TAAAGTCGAGGAGGCGACTCGCAAAAAGGATGAGATCACCAATGAGTTTA
TTACTCAGACCAAGGAGCAGCTGGAGTCGAAAATGGAGCTGCATGTGGAG
AAGCGAGAGGCCATCATCAGTGACATGAAGGAGAAGCTAAAGATCCATGC
CCAGGATATCGAAAAGACGCGTGAGACTCTTGAGCAGCAGAAGGCCAACG
AGCAGAAGGCAATCGAGGAAAAGTTGAAGATTGCTCAGTCTCTTCGCGAT
GAGAATATCAAGAAAATGTTGGATCGCCTAAAGGAGCATAACACAATCAA
AATTGCCGAAATCAAATCGCAGAACGATCAATTGGAATGTCAAAAGATCG
AGGAGAAAGCGCGCATTTATGAGAACAAATTGTTCGCCGCCGAGCAGAAA
CGCGAAAAGGAATTGCAAAAAAAAATTGAAAAAGTTCAAAAACTCGAACG
TCGCGCTGAGCTCGTGCGCCAGAACAAGGCCCAGGCCCAGGATTTGGATG
GTCAGCAGAGCGCCATTGCCTCCTCAGGCGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGGTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCCAACCGAGCGTTCTGAACAAATC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCACAGGAGTCCAGGCGAG
CTCGATTATCAAATTACGTCGCTGCACTCATCGCAGTACTGTTTGTAATT
CATTAGCATCTGCGAAATGCAAGCAATCACAAACGGCATGATGACTGATC
GCAGCGGCATC

UFO05057.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
stai-RC 1859 CG31641-RC 251..1021 9..779 3855 100 Plus
stai-RD 2872 CG31641-RD 537..1280 36..779 3720 100 Plus
stai-RE 2395 CG31641-RE 815..1557 37..779 3715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6122005..6122190 207..392 930 100 Plus
2L 23513712 2L 6121772..6121943 35..206 860 100 Plus
2L 23513712 2L 6122698..6122859 540..701 795 99.4 Plus
2L 23513712 2L 6122260..6122410 389..539 755 100 Plus
2L 23513712 2L 6122978..6123061 696..779 420 100 Plus
Blast to na_te.dros performed 2014-11-28 20:57:07
Subject Length Description Subject Range Query Range Score Percent Strand
Tirant 8526 Tirant TIRANT 8526bp 7724..7808 360..444 110 58.8 Plus

UFO05057.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:34 Download gff for UFO05057.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 250..1024 9..784 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:29 Download gff for UFO05057.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 9..784 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:37 Download gff for UFO05057.5prime
Subject Subject Range Query Range Percent Splice Strand
stai-RC 251..1025 9..784 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:37 Download gff for UFO05057.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6101771..6101792 9..30 100 <- Plus
2L 6121772..6121943 31..206 97 -> Plus
2L 6122005..6122190 207..392 100 -> Plus
2L 6122264..6122410 393..539 100 -> Plus
2L 6122698..6122853 540..695 100 -> Plus
2L 6122978..6123065 696..784 97 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:29 Download gff for UFO05057.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6101771..6101792 9..30 100 <- Plus
arm_2L 6121772..6121943 31..206 97 -> Plus
arm_2L 6122005..6122190 207..392 100 -> Plus
arm_2L 6122264..6122410 393..539 100 -> Plus
arm_2L 6122698..6122853 540..695 100 -> Plus
arm_2L 6122978..6123065 696..784 97 == Plus