UFO05063.5prime Sequence
1094 bp (987 high quality bases) assembled on 2009-06-30
> UFO05063.5prime
CAGTCGACATGCGAGTTTTAGGAAAGTGCACTGTTTTGGTCAGGCAAACC
CGCAGCTTATCCACGCCATCTGGGCGCCGCAGAGTGGTGGTCACGGGAAG
TGGCGCAGTCACTCCGCTGGGCAACAATGGACCGGATTCTTGGCGACGCA
TCCTGGCCGGCGAGTCGGCAATTTCTCGGCTGAGTGCGGAGTTTAAGGGC
TTGCCCTGCCAGGTTGCGGCTCAAATCCCGAGGGAAAACCTACAGCTGGA
TCAACACCTGACCAAGTCGGACATTAAGCTGATGAGCCCCGCCACGCAGC
TTGCCGTATTGGCGGCTGAGGAGGCCTTGTCAACCGGAAAGCTGTGCCCC
AAGCAATTGAGCGAGGAGGAGCTTGAGCGGTTCGGAGTGTGCGTGGGCAT
GGGCATGTTCGACCTTGCAGAGGTCTATGGCGCCTGGAACCAGCTGCAAC
GAGGTTACAACAGAGTAAGCCCCTTTTTCGTGCCCAGGCTGCTGCCCAGT
ATGGCGTGTGGTCACATAAGCATGCGACATGGCTTAAGAGGACCTAACCA
CTCGGTGTCCACGGCCTGCGCCACAGGTGCCCATGCCCTGGGCGATGCCA
TGCGCTTCATTCGCAGCGGAGATGCCGACTTGATGCTGGCGGGGAGTGGT
GAGGCCTGCATAGATCCGCTCTCCATCGCTGGATTTTGCAGACTGCGGGC
TCTGAGCACCGCATTCAACGATAATCCGGCGGTTGCGTCCAGACCGTTTG
ACAAGTCCCGGGATGGCTTCGTGATGGGCGAGGGCGCAGCTGTGCTCTTG
CTGGAAGAACTGGAGCACGCCCGCGCTCGGGGAGCTCCCATTCTAGCTGA
GATTCTGGGCTACGGCTTGTCCGGCGATGCCTATCACATAACGTCGCCCA
GCGATGACGGCGCCGGAGCCACTCTTGCCATGAAGCGGGCCATACAAGAT
GCTGGGATTGCACCAGAGATGTTACGTATGTAAATGCCCACGCACCTCCA
CGCCCCCCGGGGATCGCCATTGAGTCACCCGCTATAGGTCGTGTTTTCGG
GCGCCACACCTCCGGCAGGTGAGGTCTCCCTCCACCAAGAGCCA
UFO05063.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12170-RA | 1424 | CG12170-RA | 29..1112 | 5..1089 | 5175 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5637262..5638309 | 5..1051 | 5050 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:39 has no hits.
UFO05063.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:40 Download gff for
UFO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 22..1110 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:14 Download gff for
UFO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 25..1113 | 1..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:03 Download gff for
UFO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12170-RA | 25..1113 | 1..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:03 Download gff for
UFO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5637258..5638346 | 1..1093 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:14 Download gff for
UFO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1462980..1464068 | 1..1093 | 98 | | Plus |
