UFO05064.5prime Sequence
1125 bp (1000 high quality bases) assembled on 2009-06-30
> UFO05064.5prime
CAGTCGACATGAAGCCCACCAATAACTCAACCCTGGAGGTAATCTCGCCG
AAAGTGCAGGTGGACGATGAGTTCATCACCACCGACTACGATTACCAGAC
ATCCCATGTGAAGCGCACCGCCGATGGACAGCTCCAGGTGCACCCCCAGA
CGACGTCGCTGAAGATACGGACGGGTCGCCATGTGCCCAAGCTGGGCGTG
ATGCTGGTGGGATGGGGTGGCAACAACGGATCCACGCTGACCGCCGCCCT
GGAGGCCAATCGTCGCCAGCTGAAGTGGCGCAAGCGGACGGGCGTCCAGG
AGGCCAACTGGTATGGTTCCATTACACAGGCGTCCACCGTCTTCATTGGA
TCCGATGAGGACGGCGGTGACGTGTACGTGCCCATGAAGGAGCTGCTGCC
CATGGTGGAGCCCGACAACATTATCGTGGATGGCTGGGATATCAGTGGCC
TGCATTTGGGCGACGCCATGCGCAGGGCCGAGGTCCTAGACGTGGCTCTG
CAGGATCAGATCTACGATCAGTTGGCTCAGTTGCGCCCACGTCCATCCAT
CTACGACCCCGACTTCATCGCGGCCAATCAGTCGGATCGGGCTGACAACG
TGATCCGTGGCACTCGTCTGGAGCAGTACGAGCAAATCCGGAAGGACATC
CGCGACTTCCGCGAGCGCAGTGGCGTCGATTCGGTCATCGTCCTCTGGAC
TGCCAACACGGAGCGCTTCGCGGATGTCCAGCCTGTCTGAACACCACCAG
CCAGGAGCTCATCGCCTCCCTGGAGGCCAACCACTCGGAGGTGTCACCCT
CCACGATCTTCGCAATGGCCAGCATCGCCGAGGGGTGCACCTACATCAAC
GGCTCTCCCGCAGAACACCTTTGTGCCCGGACTGATCCAGCTGGCCGAGG
AGAAGATGTTTTCATTGCCGGCGATGACTTCAAGTCCGGTCAGACCAGAT
CAGAGCGTGGTGGTAGATTTCTGGTGGGAGCTGGTATCAAGCGTGTCATG
CAGTACAACATCTGGGCACACGATGGCAGACTTGTCCGCTCCTCAACAGT
CCGCTCAGGAGATTCAAGAGCACTGGTGGAGAATTGATGCCTCCACAGGC
TGTGACGGAACGATGAAACCGGACA
UFO05064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inos-RA | 1986 | CG11143-RA | 138..1257 | 9..1103 | 4915 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7456149..7456850 | 835..135 | 3460 | 99.9 | Minus |
| 2R | 25286936 | 2R | 7458607..7458737 | 139..9 | 655 | 100 | Minus |
| 2R | 25286936 | 2R | 7455917..7456077 | 992..835 | 545 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:40 has no hits.
UFO05064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:41 Download gff for
UFO05064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 123..1210 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:29 Download gff for
UFO05064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 134..1221 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:21 Download gff for
UFO05064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inos-RA | 134..1221 | 1..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:21 Download gff for
UFO05064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7455834..7456076 | 836..1061 | 91 | <- | Minus |
| 2R | 7456149..7456847 | 138..835 | 99 | <- | Minus |
| 2R | 7458609..7458741 | 1..137 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:29 Download gff for
UFO05064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3343339..3343581 | 836..1061 | 91 | <- | Minus |
| arm_2R | 3343654..3344352 | 138..835 | 99 | <- | Minus |
| arm_2R | 3346114..3346246 | 1..137 | 97 | | Minus |
