UFO05072.5prime Sequence
615 bp (615 high quality bases) assembled on 2009-06-30
> UFO05072.5prime
CAGTCGACATGGACTTCCTAATTGAAATAACATTACTGGTCATATTGGCA
ATTATACTGCTGAAGATCTATCATCGGGCGAAACGTAGTGCCATGGCGCC
GTCGAACAATCGCCGGTACTTATCCTCGCAGGATATTACCAAGAACATGA
CCCTGTACACCAGCACCAAGACCCAAGTTGAGGTGGATCCCAAGACGCTG
GCCTTCAAGAAGCCCACTGGCAACCCACTGGTTCTCATGATGGCCTGGCT
GATGGCCAAGCAGAAGCATCTGAAGAAGTATGCCCAGATCTACACTGAGA
TGGGATTCGATGTGGTGGTGGTGCACATTACGCCGTGGCAGCTACTCTGG
CCGGTCAAAGGATCCCAGGTGGTGGCCGCCGAGACTATTCGATTCCTGGA
GAACAACAAGTCGTACGAACCCATTGTGATGCATGGCTTCTCCGTGGGCG
CCTACCAGCTGGGCGAGATCATGCTGCAGATGTCGCGCGACATGGATCGC
TATGGTAGCATTCTGGACCGCTTCGTGTGCCAGGTGTGGGACGGCGCCGC
CGACATCTCCGAGATCCCGGTGGGGCGTGCCCAAGTCAATCTTCCCGAGG
ATAGAGCGAGTGCAG
UFO05072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)k09913-RD | 1451 | CG3082-RD | 176..786 | 4..615 | 2930 | 98.7 | Plus |
| l(2)k09913-RH | 1259 | CG3082-RH | 62..594 | 81..615 | 2535 | 98.5 | Plus |
| l(2)k09913-RF | 1694 | CG3082-RF | 501..1029 | 86..615 | 2535 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23070607..23070900 | 87..380 | 1425 | 99 | Plus |
| 2R | 25286936 | 2R | 23070961..23071210 | 365..615 | 1115 | 97.2 | Plus |
| 2R | 25286936 | 2R | 23069580..23069662 | 4..86 | 400 | 98.8 | Plus |
Blast to na_te.dros performed 2014-11-28 21:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G5 | 4856 | G5 G5_DM 4856bp | 2673..2730 | 188..245 | 110 | 65.5 | Plus |
UFO05072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:37 Download gff for
UFO05072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k09913-RD | 174..786 | 1..615 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:28 Download gff for
UFO05072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k09913-RD | 174..786 | 1..615 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:35 Download gff for
UFO05072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k09913-RD | 174..786 | 1..615 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:35 Download gff for
UFO05072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23069578..23069662 | 1..86 | 96 | -> | Plus |
| 2R | 23070607..23070888 | 87..368 | 100 | -> | Plus |
| 2R | 23070965..23071210 | 369..615 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:28 Download gff for
UFO05072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18957101..18957185 | 1..86 | 96 | -> | Plus |
| arm_2R | 18958130..18958411 | 87..368 | 100 | -> | Plus |
| arm_2R | 18958488..18958733 | 369..615 | 97 | | Plus |
