Clone UFO05078 Report

Search the DGRC for UFO05078

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:50
Well:78
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05078.5prime Sequence

1114 bp (1003 high quality bases) assembled on 2009-06-30

> UFO05078.5prime
CAGTCGACATGGGCGACAACGTGGTGACGGAACTAAATAACTTGGATTTG
AACAATCAAAAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATC
CGGCGGTGGAGATACTCGCAAGGAACTCAGTCCCTTGCCCAAGTACATCG
AGGAGCGCAATGTCTTCTGGGAGAAGTGCAAGGCGGAATACGAGGCCGAA
CTGGCGGCCAAGAAGCGTGAGCCCATCAAGGTGACACTGCCCGATGGCAA
GCAGGTGGACGCCACCTCCTGGGAGACCACTCCGTACGAAGTGGCCCGCG
GCATTAGTCAGGGTCTCGCTGACAACACCGTCATCTCCAAGGTGAACGGC
GAGGTGTGGGATTTGGACCGTGTGCTCGAGGGAAACTGCACCCTGCAGCT
TCTCAAGTTCGACGACCCTGAGGCGCAGGCCGTCTTCTGGCACAGCTCTG
CCCACATCATGGGTGAGGCCATGGAGCGCATCTATGGTGGACACCTGTGC
TACGGTCCGCCCATTGAAAACGGCTTCTACTACGACATGCATCTGGAGGG
CGAGGGTATCTCCACCAACGACTACGGCGCCATGGAGGGTCTGGTTAAGC
AAATTGTCAAGGAGAAGCAGAACTTCGAACGTCTGGAGATGAAGAAGTCC
GACCTGCTGGAGATGTTCAAATACAATGAGTTCAAGGTGCGCATTCTCAA
CGAGAAGGTGACCACCGACCGCACCACTGTCTACAAGTGCGGTTCTTTGA
TCGATCTCTGCCGCGGACCTCATGTTCGTCACACCGGCAAGGTGAAGGCC
CTGAAGATCACCAAGAACTCCTCTACCTACTGGGGGGGGAAGGCTGACGC
TGAGACACTGCAACGCGTCTACGGCATCTCGTTCCCCGACCCGAAGCAGC
TCAAGGAGTGGGAGAAACTTCAGAGGAGGCGGCTAGCGTGATCACCGCAA
TCGGTCGCGAGCAGGAGCTGTTCTTCTTCCATGAACTTTCGCTGGCTCAT
GCTTTCAGCGCGAGGAGCGCACATCTACACACCTGATGGCTCATCAGCGG
ATATAAAGCGTGGATCAGAGTCATTCCCCACATCTCACAGCTAAGTTTGG
ATGACTCGCCTGCA

UFO05078.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-thr-RB 2298 CG5353-RB 31..1154 9..1105 4940 97.2 Plus
Aats-thr-RD 2796 CG5353-RD 306..1376 62..1105 4675 97 Plus
Aats-thr-RA 2520 CG5353-RA 306..1376 62..1105 4675 97 Plus
Aats-thr-RD 2796 CG5353-RD 31..86 9..64 280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12104687..12105121 123..557 2175 100 Plus
2L 23513712 2L 12105176..12105656 558..1029 2030 97.7 Plus
2L 23513712 2L 12104490..12104552 61..123 315 100 Plus
2L 23513712 2L 12103781..12103836 9..64 280 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:43:38 has no hits.

UFO05078.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:04 Download gff for UFO05078.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-thr-RB 48..1098 9..1046 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:32 Download gff for UFO05078.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-thr-RB 31..1081 9..1046 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:15 Download gff for UFO05078.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-thr-RB 31..1081 9..1046 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:15 Download gff for UFO05078.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12103781..12103834 9..62 100 -> Plus
2L 12104492..12104552 63..123 100 -> Plus
2L 12104688..12105121 124..557 100 -> Plus
2L 12105176..12105677 558..1046 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:32 Download gff for UFO05078.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12103781..12103834 9..62 100 -> Plus
arm_2L 12104492..12104552 63..123 100 -> Plus
arm_2L 12104688..12105121 124..557 100 -> Plus
arm_2L 12105176..12105677 558..1046 97   Plus