UFO05082.5prime Sequence
1061 bp (944 high quality bases) assembled on 2009-06-30
> UFO05082.5prime
CAGTCGACATGAGTGGCGAACGCCGCAGAACCACCACACACAGTATTGAG
GTGCCATCGCAGCTGACGGCGCAGCACAATTCCCGGAAACGTCCGCCCAG
CGATCACCAGGACTACGGCAACTATCTGGAAACATGCCGTGCCGCCGAGA
TTCTGTCATCGATGAAGTTGCAGAGTCCGCATGGCTCAATGGCCGACAAG
TGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCTGGAGCTCCGGTTCCCC
GTCGCCGCCATTGAGTGACGACGGCCACGCCCACCACAGCCCACACAATA
TCATGTCGCCCCACGATGCGGACAACGCACGCACACGCACAGCATCCGTG
TCCACGTCGGACGAGGGCATTGTCATCGACTACAAGGAGGAGCGCAAGAA
AAAGGTGGGTGATTCGATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGT
GAAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAA
ACCCTTTAGGAAATAGCCAGGTTTTCACGTACACGCCACATCTTGCGAAT
ATATTGTGTAGAACTGCGGAATCGTCTGTATCACTCCAGACGATGAAACG
TTTCAGTGCTCATGAAACGGTGTACAGGTGAACTTCAATTCACAGCTCAC
CGTCTTCATGG
UFO05082.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RE | 2589 | CG34360-RE | 918..1332 | 5..419 | 2075 | 100 | Plus |
| Glut4EF-RD | 4787 | CG34360-RD | 1651..2060 | 5..414 | 2020 | 99.5 | Plus |
| Glut4EF-RH | 10796 | CG34360-RH | 1651..2050 | 5..404 | 2000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9943677..9943909 | 187..419 | 1165 | 100 | Plus |
| 3R | 32079331 | 3R | 9943481..9943587 | 80..186 | 535 | 100 | Plus |
| 3R | 32079331 | 3R | 9930471..9930545 | 5..79 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:41 has no hits.
UFO05082.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:48 Download gff for
UFO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RE | 915..1336 | 1..424 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:58 Download gff for
UFO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RE | 915..1336 | 1..424 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:53 Download gff for
UFO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RE | 915..1336 | 1..424 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:53 Download gff for
UFO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9930468..9930545 | 1..79 | 97 | -> | Plus |
| 3R | 9943481..9943587 | 80..186 | 100 | -> | Plus |
| 3R | 9943677..9943909 | 187..419 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:58 Download gff for
UFO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5756190..5756267 | 1..79 | 97 | -> | Plus |
| arm_3R | 5769203..5769309 | 80..186 | 100 | -> | Plus |
| arm_3R | 5769399..5769631 | 187..419 | 100 | == | Plus |
