UFO05089.5prime Sequence
1136 bp (1028 high quality bases) assembled on 2009-06-30
> UFO05089.5prime
CAGTCGACATGACGACTACATTAGAAGAGCAGCTTTCAGACAAGTTGCAG
ATGATGGACGAGACCACGGATAAGGTCCAGGGGTCGTCGAAGCAGAAGGA
TGATAGCAGTATAGCCGCAAGTTCAGATGCCAAGACAGCGTCCCCTTCTT
CGAGCGATAGTTCGACCAAAGTCGCCGCACCGGAGTCCGAATTTTACAAT
AAGGCACAAAAATATTGGTCTGAGGTACCGGCGACTGTTAACGGGATGCT
CGGCGGCCTGGGCTACATTAGTGCCATAGATATACAGGGATCGAATGTGT
TCCTGCGCGAGATCCGCGTGCCGGGCAACAGGTTGGCCCTCGACTGCGGA
GCTGGCATTGGTCGGGTGACTCGGAATCTCCTGATCCCCCGCTTCAGCTG
CGTGGATCTTGTCGAGCAGGATCCCGCGTTTGCCGATAAAGCACGGGAGT
ACTGCACTTCGGAAGACGGAAGCCGTGGAAAGGTGGGACAGATCTATAAC
GTGGGATTGCAGAAGTTTACGCCTACGCAACAGTACGACCTCGTTTGGAC
CCAGTGGGTCCTGGGCCATCTCACGGACCGCGATCTGGTCTCGTTCTTTC
GACGCATAAAGCAGGGACTGGCGCCCGGCGCCTTCTTGTGTCTGAAGGAG
AACGTGAGCAGCTCGAAGAAGACAGTGGAAGATAGGAACGACTCGTCGGT
AACGAGGCCTCTGGACAGCTATGAACACTTCCTAAAGGAAGCCGGATTTC
GCATTGTACGCAAGGTCAAGCAACAAAACTTTCCCAAGGGACTCTTTCCA
GTGTACATGATAGCCTGCAAACCCGTCTCCAAGGAAGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACACTAGCCTAGAAGATCCTGGTCATGACTAGTGCT
TGGATTCTCCCCAATAAAAAAACGCCCGGGGCCAACCGAGCGTCTGAACA
ATTCAGATGGAGTCTGGAGGTCATTACTGGATCTATCAACAGGAGTCAGC
GAGCTCGATATCAAAATTACGCCGCTGCAGTCATCGAGTACTGGGTGTAT
TCATTAGCATCTGGCGACTGAAGCCTCACCAACGGC
UFO05089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntmt-RA | 1053 | CG1675-RA | 73..900 | 9..836 | 4140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9865704..9866531 | 9..836 | 4140 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:36 has no hits.
UFO05089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:15:01 Download gff for
UFO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1675-RA | 56..886 | 9..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:23 Download gff for
UFO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..907 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:05 Download gff for
UFO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntmt-RA | 73..907 | 9..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:05 Download gff for
UFO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9865704..9866538 | 9..845 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:16:23 Download gff for
UFO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5753209..5754043 | 9..845 | 99 | == | Plus |
