UFO05090.5prime Sequence
1079 bp (966 high quality bases) assembled on 2009-06-30
> UFO05090.5prime
CAGTCGACATGACTGGATCAGTGCACGATCCGAAATGGAGCCTGGAGCGC
CGCGAGTCCTCTGGCCATTTGGTGTGGCGCAAGGACTCTCCGGAGTCGAA
AGTCCGTTTTCGCTTCGACGTCGAGGTCCTGGAGTTCGAGAGGCATCCTC
ATGAGGAGCTGGATGACAAAGAGGATCACTTCTCGATGACCAATCTCTCG
GCGACAGTGGCCATGTGCGCAACTTGTGTTGCCGTGGTGGCCGTCTCCGT
GTTCCTGCCCTGGTATTTGATGGAGAAAGTGGGATCGCTTGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAG
ACGAAAAACATATTCTCAATAAACCCTTTAGGGAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATC
GTCGTGGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAA
AACGGTGTAACAAGGTGACACTATCCCATATCACAGCTCACCGTCTTTCA
TTGTCATACGAATTCCGATGAGCATTCATCAGCGGGCAGATGTGGATAAG
GCGGATAAACTGTGCTTATTTTTCTTTACGTCTTAAAGCGTAAATCACTG
ACGACTGGTTTAGTACTGGACACTGACTG
UFO05090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18622-RB | 752 | CG18622-RB | 154..435 | 9..290 | 1410 | 100 | Plus |
| CG18622-RC | 949 | CG18622-RC | 351..632 | 9..290 | 1410 | 100 | Plus |
| CG18622-RA | 837 | CG18622-RA | 239..520 | 9..290 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16983827..16984097 | 290..20 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:54:29 has no hits.
UFO05090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:15:03 Download gff for
UFO05090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 438..729 | 1..294 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:18 Download gff for
UFO05090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 232..523 | 1..294 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:26 Download gff for
UFO05090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18622-RA | 232..523 | 1..294 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:44:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:44:18 has no hits.
