UFO05114.5prime Sequence
573 bp (342 high quality bases) assembled on 2009-06-30
> UFO05114.5prime
CAGTCGACATGTTCCCGCGGCTCTGGGTCCGCAGCTTCCATAAATATGAT
CTTCTCATCGCCATCGGACTGATCACTCTCATCGTGTACCTGTGTCTGCC
CTTCCGGTTCGCATCGCACTACGACTACATCGAGGAATCAAAGATCGAGG
GGGCTCTGGTGCCGCAGGTGACCAGAAATGTCTCCCAGCAGGAAGTTTTC
GAATGCACCTACTCGGAGATCATTGCCGAAAACCGGTTCGTCTACCACCT
GGCCCATTACCATGACGCGGTGCAGAGGGGCGCGGAGATCCGTCCTGGCG
GCGAGTTCCGTCCGGAAGGATGTCTTGCTCGCTACAGCACCGCCATCATT
GCGTCGTACTGGCAGCGGGAGGAGCAGCTGCACGCCTTCCTCATGTACAT
GCACAATTACCTGCCGCAGCAGCTGATCCACTATCGGATTTTTCTGGTCG
AACAGTTCTATCATAAGCCGTTTAACAGGGCGATGCTCTTCAACATTGGC
GCCCTGGTGGCTGCGGAGTATGGATTTCCCTGCCTCATCCTTCATGACGT
GGACCTCCTGCCCTGAATTCCGG
UFO05114.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beta4GalNAcTB-RA | 1349 | CG14517-RA | 90..652 | 9..570 | 2625 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29033366..29033919 | 562..9 | 2605 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:19 has no hits.
UFO05114.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:34 Download gff for
UFO05114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..654 | 9..573 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:47 Download gff for
UFO05114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..654 | 9..573 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:22 Download gff for
UFO05114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beta4GalNAcTB-RA | 90..654 | 9..573 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:22 Download gff for
UFO05114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29033354..29033919 | 9..573 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:47 Download gff for
UFO05114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24859076..24859641 | 9..573 | 97 | | Minus |
