UFO05126.5prime Sequence
536 bp (447 high quality bases) assembled on 2009-06-30
> UFO05126.5prime
CAGTCGACATGTCGGAAAAGAAGCGAGCCCGTCGCCGCAAGGATGAATAC
ACCGAACCGGGTGCCCAGAAGGTAGACAAGCCGTCAAAGGACGAGAAGAA
CGTGGCCAAGTGGCTGAAGAAGAACGTTAAGACGAAGAAGACCAAATTCC
TGAGCCACATCGTCGAATACTTCACCTCCAGCAAGGCCATCGATGCTCTG
CTAAAGTCCAAATTCACCGAAGGCAGCAATCCGCTTTTCACCACCCGGGA
GCAGGTAATCGAGTTTCTAGACGTGATGCTGGAGCACAAGTTCTTCCATC
GCGCCAAGAAGGTGCCCGTCACTCTGGAGGAGATCAGAGGAAAGTCTGGA
GGCGACAAGAAGGCGGACAAGGAGAAGACCCAAGATAAGGAAAAGGACAA
GGCAAAGGATGAGAAGAAGGATACCGATCCGGAAGGCGATAATGGCCAAG
GAGACGGAGGTGCGTCTGGCAACGAAAAAGAGAAGGAGAAAAAGGAGAAC
AAAAAGCGCAAGATCCTCCTGGACATGCATCCTGAT
UFO05126.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trp1-RD | 1484 | CG4758-RD | 121..647 | 9..535 | 2605 | 99.6 | Plus |
Trp1-RA | 2045 | CG4758-RA | 121..647 | 9..535 | 2605 | 99.6 | Plus |
Trp1-RC | 1532 | CG4758-RC | 205..695 | 45..535 | 2425 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10010737..10011227 | 45..535 | 2425 | 99.6 | Plus |
2L | 23513712 | 2L | 10009501..10009537 | 9..45 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:49 has no hits.
UFO05126.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:45 Download gff for
UFO05126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trp1-RA | 116..642 | 9..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:17 Download gff for
UFO05126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trp1-RA | 121..647 | 9..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:15 Download gff for
UFO05126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trp1-RA | 121..647 | 9..536 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:15 Download gff for
UFO05126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10009501..10009536 | 9..44 | 100 | -> | Plus |
2L | 10010737..10011227 | 45..536 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:17 Download gff for
UFO05126.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10009501..10009536 | 9..44 | 100 | -> | Plus |
arm_2L | 10010737..10011227 | 45..536 | 99 | | Plus |