UFO05136.5prime Sequence
1039 bp (924 high quality bases) assembled on 2009-06-30
> UFO05136.5prime
CAGTCGACATGCTGGACCTATACAGACGCACGGTGGCGCGGTTTCCTCTG
GGCAGTGTCAGCTATATGTTCGCCTACGGATCCGGCGTCAAACAGCAGGA
AGGCTATGGAAAAGTCGGCAATGGAAACAACCTGCGTCCTCCGCCGGGAA
CCGTTGTGGATCTGGTCTTTTGCGTTCGTGATGCTAGGGGCTTCCATGCG
GAGAACCTGCACCGTCATCCGGACCACTATTCCGCCCTTAGGCACCTGGG
ACCGAACTTTGTGGCCAAGTATCAGGAGCGTTTGGGTGCGGGTGTCTATT
GCAACACGTTGGTGCCTCTGCCAGATGTGGGCATTACCATAAAGTACGGC
GTGGTGTCGCAGGAGGAGCTGCTGGAGGATCTGCTTGACTGGCGGCATCT
TTACTTGGCAGGAAGGCTGCACAAACCAGTGACGAATCTGGTCAATCCTT
CTGATAATCCTCCCCTCAAGGCTGCGCTGGAGAGGAATCTTGTATCCGCG
CTGCAAGTGGCTCTGCTACTTTTACCAGAGAAGTTCACTGCCTACGGACT
TTTCCACACCATCGCCGGACTGAGTTACAAGGGCGATTTCCGTATGATTT
TCGGGGAAAACAAACAGAAAGTGCACAACATAGTTAGTCCGCAAATCAAT
GACTTTCTTCGCCCTATACCAACCCTCCCTGGGACAACTTTCCGACTATG
TGGCGGTAAACATGAAGGGCCAGGAACCAGGGAGCCGGAAACCAGCCATA
ATTCTTCGAGCATGACAAATCCTCATCGGCTACATGCCAACACCTGCGAC
AGTTGCCCCGAGAGCTTCAGAAGCGATTGCAGCGAAATGCCGCCTGTCGT
GCGACTACACCCAGTGTTGAATCACCTATCCATGGCCCTCCCAGCTTCCG
GAGGTGCTGCAGCATCCGTCAACGACATTGTGTGCGCAGCATGTCACGCA
ATCGATCAAAATATTTCCGGGCTGGCATTCTCCAAGTCATGGCGTATACT
ATCGCAAGTCTCAAAAGAATTCCCTGTTTGCAAGCTTTC
UFO05136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33331-RA | 1284 | CG33331-RA | 127..1153 | 9..1029 | 4715 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14886582..14887596 | 9..1018 | 4380 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:07 has no hits.
UFO05136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:43 Download gff for
UFO05136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 101..1135 | 1..1030 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:51 Download gff for
UFO05136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 101..1133 | 1..1029 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:06 Download gff for
UFO05136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33331-RA | 121..1153 | 1..1029 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:06 Download gff for
UFO05136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14886576..14887608 | 1..1029 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:51 Download gff for
UFO05136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10712298..10713330 | 1..1029 | 97 | | Plus |
