UFO05140.5prime Sequence
274 bp (123 high quality bases) assembled on 2009-06-30
> UFO05140.5prime
CAGTCGACATGGCGTCATCTTTTACGGACGAGGAGTCTTCCCTCTCCAAA
AACAATCGACAGAAAAGGAAATTTCCCGGCACGGATTCGGGTCTCACGGG
CAAGAAGGGTCGGCCCAGTTCCGATATTACGGGCCAGATGGAAAGTTGCC
ACCGCATGGCTATCCATTGGAACACCCCTTCAACAAGGGATGGCTTATCG
TTATATACTCGCCCGAAACGGGATCCACATGCTCCCTTTTCGTCAGGAGT
TTCGACGATTAGTTCCGATTGGGG
UFO05140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ash2-RB | 1413 | CG6677-RB | 187..442 | 9..273 | 1010 | 94.3 | Plus |
| ash2-RE | 1271 | CG6677-RE | 73..300 | 37..273 | 870 | 93.7 | Plus |
| ash2-RC | 1949 | CG6677-RC | 751..978 | 37..273 | 870 | 93.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24651861..24652068 | 37..251 | 690 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:55:52 has no hits.
UFO05140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:53 Download gff for
UFO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ash2-RB | 72..332 | 1..274 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:37 Download gff for
UFO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ash2-RB | 182..442 | 1..274 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:47 Download gff for
UFO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ash2-RB | 182..442 | 1..274 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:47 Download gff for
UFO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24651861..24652088 | 37..274 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:37 Download gff for
UFO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20477583..20477810 | 37..274 | 93 | | Plus |
