UFO05144.5prime Sequence
1117 bp (886 high quality bases) assembled on 2009-06-30
> UFO05144.5prime
CAGTCGACATGGGAAAGAAGCTGGATGTGGTTGTCTTCGGGACGGCAAAC
ATCGAATATATAACATATGTCCCGGAATTGCCGAAACCCGGTGAACTTGT
CGCCGGAACGTACATGGAGACCTGTTTCGGTGGCAAGGGAGCCAATCAGT
GTGTGGCAGCTGCCAAATTGGGGGCCTCCACCGTCCTGGTCGCCAAGTTG
GGCAAGGACGAATCGGGCGATGACTACCTAAACCACCTGCAACAGCACGA
GGTTGATGTGACGCACGTCCAGCAGGTGGAGAACAATCCCACGGGCATGA
GTGAAATCGCGGTTTCTGAGAATGGAGATCAGTACAAGATCAACGTGGCT
GGTGCGAATGTATTTCTCACGGCCAAGGATGTGACCCGGGCTAAGAAGTC
CTTTCAGGATGCGAAGGTGCTTCTCTGCCAACTGGAAACGGATATGAATG
CCACCATGTGTGCGTTGCGTCAGTTCAAGGGGGTTTCCCTGCTCCACATG
TCGCCAATGCGAAAAGATATTCCAAATGCCATGATTGGCTTGCCTACTAT
TCTGGTTGCGAATCAAGAGGCAGCTGCCAACCTAACCGATATGGAAGAAG
TGTTAACCCCTGATCAGGCGCGAAAAGCAGCTGAAACTCTTATCGCAAAG
GGAGCCAAGAGCGTGATCATTACCATGGGCGAGCAAGGAGCCGTTTACAT
GTCCAAGAAGAGCAAAGATATGTGCACCCATGTGCCCCGCCTCCGATGTG
CCGCACTTGGCCGATCCCTCGGGTGCCGGTGATGCCTTTATGGGCAGCTT
GGCCTATCACATAGCTTCGATTTCCCAAACTGTCCACAGAACATTCATTA
TCAGTGCGGCACACTCCTGCGCCCGCCTACTTCATGGGCCGCGCGACACT
CAGCCAAGTTTTCCGGCAAGAAAGCGCCAAAAGTGACCTATGCTATCGAA
CGCCCACGTTAGTGTCATTCCACCTCCTAGTCCGCAACATGAAGATGAAT
ATATTGGTAACAAAGACGCCTCCGTCTTCATGGTATTCCCTTACCGCCCG
AAGAACGCCCACTCCAAATGGAATTTGGGAAAATCCAAAAACTGTACCTC
TCTCATCGTTAGAGTAT
UFO05144.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17010-RA | 1413 | CG17010-RA | 97..1189 | 9..1100 | 4795 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12356646..12357609 | 65..1030 | 4210 | 97.5 | Plus |
| 2L | 23513712 | 2L | 12356537..12356592 | 9..64 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:33:14 has no hits.
UFO05144.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:12:56 Download gff for
UFO05144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 90..1130 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:17 Download gff for
UFO05144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 90..1130 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:51 Download gff for
UFO05144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17010-RA | 90..1130 | 1..1044 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:51 Download gff for
UFO05144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12356530..12356592 | 1..64 | 93 | -> | Plus |
| 2L | 12356646..12357633 | 65..1055 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:17 Download gff for
UFO05144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12356530..12356592 | 1..64 | 93 | -> | Plus |
| arm_2L | 12356646..12357633 | 65..1055 | 97 | -> | Plus |
