UFO05147.5prime Sequence
1080 bp (960 high quality bases) assembled on 2009-06-30
> UFO05147.5prime
CAGTCGACATGAACCGCGGTACCATTATGGTGTGCTTGGAACCGCCATCG
TTTACTTCAAAGGACTTGGACACCCGTTTCTCCTCCTCGGGATCTTCCAC
ATCACGCTGCACCAAATCGAAATCAAATTCATCAAAGCGAATTCTTCGCA
GCTCCGGTTACACAGAGCTGAACAGCAACTCGACTACTCTGCTGTCCAGC
GAGGACGAACTTACTCCGCGTCAGCGCCTCGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTT
TAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACAC
GCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTATT
CACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAAC
AAGGGTGAACACTATCCCATATCACCAGCTCACGTTCTTTCATTGCCATA
CGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGATTGTGATAAGGCCG
GATAAAACTTGGTGCTTAATTTTTCTTTACGTCTTTAAAAGGCGTAATAT
CAGCTGACGGTCTGGTATAGGTACATTGGAGCACTGACTGATTGCCCTCA
AATGTCTCTTACGAGTGCATGGAAATATCT
UFO05147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9203-RA | 2349 | CG9203-RA | 1974..2057 | 83..166 | 285 | 89.3 | Plus |
| CG9203-RA | 2349 | CG9203-RA | 2096..2146 | 178..228 | 210 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5243776..5243997 | 9..230 | 1095 | 99.5 | Plus |
| X | 23542271 | X | 15473096..15473179 | 166..83 | 285 | 89.3 | Minus |
| X | 23542271 | X | 15473007..15473057 | 228..178 | 210 | 94.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:08 has no hits.
UFO05147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:50 Download gff for
UFO05147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14033-RA | 1065..1291 | 2..230 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:51:40 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:14:48 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:48 Download gff for
UFO05147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5243771..5243997 | 2..230 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:40 Download gff for
UFO05147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5243771..5243997 | 2..230 | 97 | == | Plus |
