UFO05149.5prime Sequence
933 bp (758 high quality bases) assembled on 2009-06-30
> UFO05149.5prime
CAGTCGACATGGACAATTGCGTAACAGTCCTGCTGCCCAATGGTCGGCGG
CAGAATGTGAACGTGACGGCGAACATGACGCTGTTGGAGATTCTGGAGAC
GGCCTGCTTCAAGCACGGCTACCATGCGGAGGAGCACTGCCTCAAGTTTC
ACAACAAGGTGGTCGGATTGACGCAACAGTTCCGTTTTAGTGGCCTGCCT
AACAACTGTGTCCTGGAGATGGAGCAAACAGAAAAGCGGCGCACACTGAG
TAACGTTCTTGTCTGCGTCCAATTGAACGACGGTTCCCGCCAGCAAGGGG
ACTTCTCGCCCAACGACACCATATGGCTGGTGGTCGAGAAGCTTTGCGAA
ACACATGTAAAGGCTTACGAAAGCCCCGTCATCATCTACATGCGCAGCGA
GGTCATAGGACATGAGCATATGCGACAGACCACTCTTAAGTCCCTAGGAA
TCCTCGAGGGTCGTGCCATGATGCGTCTTATCGACAAAAAACCCGAGGAC
CTTAAGACCCAGGCAAATGTGTATAAAGCTCCCGCTGTCAAGCCTCGGGT
GGACAATGACGACCAGCCCAGTACCTCCCGCTCTGCAATGGCAGCTGGTG
GCAGCGGAGGAGGAGGTGGATTTGCTCTTTACCAGCAACATGATCAAGAT
TTTGAAAACGCTCGGCTCCTGAAGAAAAAGGCCAGCGGTAGCGGAACCAG
CCCAGGCCCTTTAGGGGAATCCTATCAAGAGCATAGCCTCAGCCAGATAC
ACCTTAATATTGACTGTGCCATTGGTTCCGGGATACTCAATGAACCTCCC
TCCCGAGCAGAACCGGCAAAAACGAAGTCGAAAAGAATCCAGGCAGGCTC
CCCCAGTGGTGGAAATAATTTGGGCCACGCCAGGCTGTCCCCTTTTCCTT
GGAAGAATCCAAGAAAAATGCAAATGACCTGCC
UFO05149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33722-RE | 3544 | CG33722-RE | 104..1023 | 9..933 | 3945 | 95.9 | Plus |
| CG33722-RD | 1585 | CG33722-RD | 104..1023 | 9..933 | 3945 | 95.9 | Plus |
| CG33722-RB | 1547 | CG33722-RB | 66..985 | 9..933 | 3945 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8244213..8245132 | 9..933 | 3640 | 95.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:40 has no hits.
UFO05149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:00 Download gff for
UFO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RB | 64..985 | 5..933 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:57 Download gff for
UFO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RC | 102..1023 | 5..933 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:34 Download gff for
UFO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33722-RB | 64..985 | 5..933 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:34 Download gff for
UFO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8244211..8245132 | 5..933 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:57 Download gff for
UFO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4069933..4070854 | 5..933 | 95 | | Plus |
