UFO05150.5prime Sequence
977 bp (940 high quality bases) assembled on 2009-06-30
> UFO05150.5prime
CAGTCGACATGGACCTGCAATTGGACAGCGAAAGCTATTGGAACCGATCC
TCTCGCGCAGCGTTCAGCTTCGACGACGAAGACGAGGTGGACCTCGCCCC
GGATCTGGTCAGCAATGGCATCCTCGCCGACGACACCATTTCGGAGGCCA
GCTTCAATAACAGTGTCGCCCTGAATCTCTCGATCAAATCCATTCTGAGC
GAGGAGGCATTGAAACTGGTGCTGCAGGAACAGGCGCTGGACGACAGGGT
CCTGCCCAAGGGTGTCTCGCCGGAGGAGGAGCTGAAGCTGCTGCGCCGAC
AGCTTCAGAGCACCCTGTACAGCCCCAATCTAGAAGCCACTGCACAGAAG
CTGCTGCAAGGAAAGACTGCGCCCTTGGAGATGTTCAAGTCGCTGCATGA
GAAGCAGCAGCTGCTGGACACCCTGATGGCACAAGGTGGTGGGCATGCCG
TCATTACAGTGTTGCTCTTCCTCAAGAGAACTCTGAATACCACGCAGTTT
CATGGCATTCTGAGGGAGAGACCCAAGGCCTTGGAGCAGTATCTGAGTTA
CCTGAAGGAAAGTGGCGACCTGGCGGGCCATATTGAGCTACTGCAGCTAT
TTGGACGCCACCAGGAGGCGGCTCTTAAGCAGTTTCAGGCAGCGCTCGCT
TCCGGAGATACGAGCACCAGGAAGAAACACCTCCAGCTTTTGGTGGATGC
CTATGCCACAGCGGGAGTGGGTGTAATACCTCTCTACGAGCAGGTTTTTC
ACGCTGCCCCTCAAGATGCAGCAGCTAATGGAGAAAGGATAGCGCGCTCG
GCAAGCTGCTTCGGGATCACCCAACTCCAGTGGAAGTGCTCTATGCTTGC
TGCCAGGTGAACAGCAATTGGAAAGAGCAGGATATGCTCAATCAGTGTCA
CTCAGCGTTTGCCGCCGACCAGCAAATATCGCCCGGCCAGTACGAGTGGA
CGGCGCTCATGAAAGGGCGCATGCACA
UFO05150.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps16B-RA | 1531 | CG18112-RA | 46..1016 | 9..977 | 4625 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29815436..29816406 | 977..9 | 4475 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:53:31 has no hits.
UFO05150.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:01 Download gff for
UFO05150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 45..1014 | 9..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:44 Download gff for
UFO05150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 46..1015 | 9..976 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:57 Download gff for
UFO05150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps16B-RA | 46..1015 | 9..976 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:57 Download gff for
UFO05150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29815437..29816406 | 9..976 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:44 Download gff for
UFO05150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25641159..25642128 | 9..976 | 98 | | Minus |
