UFO05155.5prime Sequence
1162 bp (1027 high quality bases) assembled on 2009-06-30
> UFO05155.5prime
CAGTCGACATGAAGCTCTCAGCAGTATTGTTGGCCATCGCGCTGCTTGCC
CTCTCGCTGGTCCAGTGCCTCGGCCTGCCCGATCCCAGCACCAAGTGCGT
CATGGAGTGCGACACGCAGGAGTACCGATCCATTTGCGCTGCGGACGACA
AGGGCTCCACCAAGACCTATCGCAATCTGTGCGTGATGAAGACGGAAAAT
TGTCTCCAGAATGCAAACTTTCAAAAGATCAGCGACAAGGAGTGTCCGGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTA
TCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGC
CATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT
GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGAT
TGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCC
AGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTG
CCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTT
GCTCATGGAAACGGTGTAACAAGGGTGACACTATCCCATATCACCAGCTC
ACGTCTTTCATTGCCATACGAATTCCGGATGAGCATTCATCAGCGGGCAG
ATGTGAATAAGGCCGGATAAACTTGTGCTTATTTTTCTTTACGTCTTTAA
AAGCCGTATATCCAGCTGACGGTCTGGTTATAGGTACATTGAGCAACTGA
CTGAAATGCCTCAATGTTTCTTACGATGCCATGGAATTATCACGGTGTAT
ATCCAGGATTTTTTTCCATTTTAGCTCTCTTAGCTCTCTGGAAGAAATCC
ATAACTCTCGTA
UFO05155.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17278-RA | 1934 | CG17278-RA | 1464..1705 | 7..248 | 1180 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21021405..21021584 | 216..37 | 885 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:53:38 has no hits.
UFO05155.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:05 Download gff for
UFO05155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17278-RA | 1455..1712 | 1..255 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:48 Download gff for
UFO05155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17278-RA | 1455..1712 | 1..255 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:01 Download gff for
UFO05155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17278-RA | 1455..1712 | 1..255 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:01 Download gff for
UFO05155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21021273..21021304 | 217..248 | 96 | <- | Minus |
3R | 21021405..21021584 | 37..216 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:48 Download gff for
UFO05155.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16846995..16847026 | 217..248 | 96 | <- | Minus |
arm_3R | 16847127..16847306 | 37..216 | 99 | <- | Minus |