UFO05160.5prime Sequence
1098 bp (968 high quality bases) assembled on 2009-06-30
> UFO05160.5prime
CAGTCGACATGGAACGATTCGCACTGACAACCTGCATTCGCCGTGTCTGG
ATCATGTCCGGATGGCTGCGCCAGGAGGCGGCAATAGCAGCCGGCATGTT
GGTGGTGCAGCGACACCAGGTTGAGCTGAGGAATGAGGAGGAGGAGGGGC
TCAAAGTCGGACAGCAGACTGCATCCAGTGGCGGTGACGTGGGCGTGGAC
TCGCAAGGAAGACTCCGCCGCGTGCGGCTGCTAGACGACTACATTGTGCC
CTTTGAATGCGGTCTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAA
AACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGG
TGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAAC
CCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGA
ATATATGTGTAGAAACTGCCGGAAATCGTCGTGTTATTCACTCCAGAGCG
ATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGGTGAACAC
TATCCCATATCACCAGCTCACCGTCTTTCATTGCATACGAATTCCGGATG
AGCATTCATCAGGCGGGCAGAATGTGAATAAAGGCGGATAAAACTTGTGC
TTATTTTTTCTTACGTTTAAAGGGCGTAATATCCAGCTGACGTCTGGTAT
AGTACATTGGACACTGACTGAAATGCCTCAATGTTCTTACCATGCATT
UFO05160.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33293-RA | 661 | CG33293-RA | 111..368 | 9..266 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5240307..5240564 | 266..9 | 1290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:51:13 has no hits.
UFO05160.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:12:59 Download gff for
UFO05160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33293-RA | 105..375 | 4..273 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:18 Download gff for
UFO05160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33293-RA | 105..375 | 4..273 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:52 Download gff for
UFO05160.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33293-RA | 105..375 | 4..273 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:42:52 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:42:18 has no hits.
