Clone UFO05169 Report

Search the DGRC for UFO05169

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:51
Well:69
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05169.5prime Sequence

1065 bp (970 high quality bases) assembled on 2009-06-30

> UFO05169.5prime
CAGTCGACATGCCTTTCTATATAGCGCTGTTTAAATGTTTTACTTACTAT
AACACAAAATTTATAATAGCTTTTCGATCCACATCCTTTTACATCTCAAT
TCGCTTTCTTTGCGCTTTCGCAGTTCCCTTTTTCCATGTTAACCCTTTTG
GACAGCTGTGGCCTTTCCCTGTTATTCAGCAGTTGGAGTTGATAAATTTG
TCTGATTTGTGGCCGGCTTTATGCCCTCTTCTTGTTTTCCTTTCTATTAC
CAACTCCCTGGGCTGCCAACTCATGCTCGCCATCCTCATTTCCCCCAGCA
AACACTTAACTCATTCGCAATATGCTGCCAAAATCTCAGTTGGCAAGCCA
CTAACTCATCTGCTCCCTCCGCGTTTTTCCGCCCATTTTCCTCATCTTGT
TTTTTTTTCCCAATTTGATGCTGACGACGTGGAAAAATGTTTGGTAATTA
TTCCGAATTTGGATAATTACAATGGCGCATGCGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATG
ATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAAT
ATTTGCTCATGGTGAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAATCAACTGGTGAAACTCACCCAGGATTGGCTGAGACGAAAACATATC
TCATAACCTTTAAGGAAATAGCAGTTCACCGTACACGCCCCATCTGCATA
ATGTGTAGAACTGCGATCGTCTGATTCACTCGAGCGATGAACGTCAGTGG
TCATGGAACGGTACA

UFO05169.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:18:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9423985..9424458 482..9 2370 100 Minus
Blast to na_te.dros performed 2014-11-28 21:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 6331..6403 148..75 124 64.9 Minus

UFO05169.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:20 Download gff for UFO05169.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34339-RB 1876..2357 1..486 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:19 Download gff for UFO05169.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9423985..9424463 1..482 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:19 Download gff for UFO05169.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9423985..9424463 1..482 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:03:13 Download gff for UFO05169.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9318018..9318496 1..482 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:03:13 Download gff for UFO05169.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9318018..9318496 1..482 99   Minus