UFO05175.5prime Sequence
904 bp (901 high quality bases) assembled on 2009-06-30
> UFO05175.5prime
CAGTCGACATGGATTTGTTTATCCGAAAAGAACTGAGCCTATCCACGAGC
AGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTCACATGGCT
GCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCTGCGACTGA
GCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACCTGTTCGAG
TGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGATTGCCGTGG
CTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTGTATTCGTG
AGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTCATGCACCA
CTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCTGCGTGGAG
TGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGATGCGCTTT
CTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGACGGCTAGTC
AAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACCGCAATAAA
GCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCTTTTTAGGG
AGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGCGCCACATG
ATCCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACCGGCCTTC
CTGCACAATATCTTTCTGTTCGTATCGCAATCCCGCCAATGAGATGAGAT
TCTGGGCCAATATGGAGCATGTACGTCTGGCCGGCGCCTTATTGCCTACC
TCATCGACCTTTGAATCGCCACCTGCCCTACCTAGACTTGGATGAGATGC
ATTTGACCGCTGATGCCCCATCACGGTGTCTCGCACCTGCCCGGAACGAG
CCAA
UFO05175.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8191-RA | 1486 | CG8191-RA | 14..907 | 9..900 | 4195 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15732191..15733076 | 9..893 | 4005 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:53:53 has no hits.
UFO05175.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:22 Download gff for
UFO05175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 2..905 | 1..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:57 Download gff for
UFO05175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..909 | 1..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:09 Download gff for
UFO05175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8191-RA | 6..909 | 1..902 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:09 Download gff for
UFO05175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15732183..15733086 | 1..902 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:57 Download gff for
UFO05175.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15626216..15627119 | 1..902 | 98 | | Plus |
