UFO05177.5prime Sequence
1121 bp (997 high quality bases) assembled on 2009-06-30
> UFO05177.5prime
CAGTCGACATGTGTCGCAAGATCCGGCAGAAGGTGCACGGTGAATGGCGC
TACTTTCGCAGCTGCGCCTACATGGGCGAGCCGGGCATCGAGGGCGACGA
ACGCTTCTGCCTGATGCGCACTGGCAGCTACAACATCTTCATGGAGTTCT
GCACGTGCAACAGCAAGGACGGCTGCAACTCGGCGGGCATCCATAGGCTA
GGACTGATGGGCGTCCTAACTGGCACACTGCTCTCGGTGATTGTGGCTCA
TCTTCTGCGGCAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTC
TGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAAC
GGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGA
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCT
TTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATA
TATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGA
AAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACTATC
CCATATCACCAGCTCACGTCTTTCATGCATACGAAATCCGGATGAGCATT
CATCAGCGGGCAAGAATGTGAATAAGGCGGATAAAACTTGTGCTATTTTT
TTACGTCTTTAAAAGCGTATATCCAGCTGACGTCTGTTATAGTACATGAG
CACTGACTGAAATGCTCAATGTCTTACAATGCATGGAATAATCACGGGAA
TCAGGATTTTTCCATTAGTCT
UFO05177.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crok-RA | 1033 | CG17218-RA | 288..542 | 9..263 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12173346..12173600 | 9..263 | 1275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:54:00 has no hits.
UFO05177.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:23 Download gff for
UFO05177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17218-RA | 276..539 | 1..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:00 Download gff for
UFO05177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crok-RA | 279..542 | 1..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:13 Download gff for
UFO05177.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crok-RA | 279..542 | 1..263 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:44:13 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:44:00 has no hits.
