Clone UFO05194 Report

Search the DGRC for UFO05194

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:51
Well:94
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05194.5prime Sequence

1061 bp (955 high quality bases) assembled on 2009-06-30

> UFO05194.5prime
CAGTCGACATGGAAATGGAAAAGTCTGGCAAATTTTCAGATTACCTCTTC
GCCAAAATGGGTCCCCCCACCTCAACTGAGCTGCCTCCGAAGACCACGGA
ATGCAGCGATGCCCCCGTGGAGTTGACCGGTTACCGCAGGTGGCTCTCCG
AGAATCTAATGCTCCTGGTCACCCTTTCCGGAGTTCTCCTTGGTGTGATA
CTAGGACTCTCCTTACGGCCGCTTAATTTACATGGGGACTCCATCATGCT
GATTTCCTATCCTGGCGAACTGTTTATGCGCGTACTCAAGCTGATGATTT
TGCCGCTAGTTATATCGAGCCTTATTGCCGGATCGGCCAGCCTTAACGCC
AAAATGAACGGCAAGATAGCGCTGCGCACGTTGGTTTACTTTGCCAGCAC
TTCGTTCTTTAACGCTGCACTGGGAATCGCTCTCGTTCTGCTCATCCATC
CTGGAAATCCGGATCTGCACAATGCGGACGATCGATCTACAGATCGGCGG
GCAGTTAACCTTCTAGATAGTCTTTTGGATTTGGGCAGGAACGTATTCCC
GGACAACCTGTTTCAGGCCTCCATTCAGCAGGCGCACACCGTCTACTTGC
CCAAGCCGAGTATCCTGCACGTCTTCAACGAAACGATGAATGACACCTTG
GCATCCGGATCGGAGGCCCAACGCTTGTCTGAAGACCTTACGGAGGATGT
GGTGCTGGTGAGGGACATCCAGTACCGCAGTGGAACCAACACCCTGCGCA
TCGTCTTCTTCTGCCTGGTGTTTGGTACTTTTTTGGGAACCATCGGCCAG
AAGGTCAGGTCGTGGTTGACTTCTTTGCCGCCATTTTTGAGCGCCGCTGC
CCTGCCCATTACATTCCGCTGCATGACGAGAAACCCAAGGTGGATCCGCG
ATCACGCGAATTTGTCCTTCCAATCGGATGCAACATCACATGGACGGAAC
GCCCTATATAATCGCAGTGCATCGATATTCATGCCCGATGAGCGCATGGT
CCTGGAATGGAAAGCTCTACGTCCTTCTGACCTCCACGCTGCCTCATGAT
TCGCCACGATT

UFO05194.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
Eaat2-RC 3398 CG3159-RC 797..1630 9..841 4115 99.6 Plus
Eaat2-RD 3169 CG3159-RD 597..1401 38..841 3970 99.6 Plus
Eaat2-RA 3057 CG3159-RA 485..1289 38..841 3970 99.6 Plus
Eaat2-RC 3398 CG3159-RC 1897..2112 842..1045 650 90.8 Plus
Eaat2-RD 3169 CG3159-RD 1668..1883 842..1045 650 90.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 740356..740692 539..203 1685 100 Minus
2L 23513712 2L 739711..740017 841..536 1470 99.3 Minus
2L 23513712 2L 740799..740995 205..9 970 99.5 Minus
2L 23513712 2L 738694..738839 982..840 375 94.6 Minus
Blast to na_te.dros performed on 2014-11-28 19:36:57 has no hits.

UFO05194.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:13:27 Download gff for UFO05194.5prime
Subject Subject Range Query Range Percent Splice Strand
Eaat2-RB 774..1847 1..1056 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:45 Download gff for UFO05194.5prime
Subject Subject Range Query Range Percent Splice Strand
Eaat2-RC 787..1630 1..841 99 -- Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:59 Download gff for UFO05194.5prime
Subject Subject Range Query Range Percent Splice Strand
Eaat2-RC 787..1630 1..841 99 -- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:59 Download gff for UFO05194.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 739711..740014 539..841 99 <- Minus
2L 740357..740690 205..538 100 <- Minus
2L 740800..741005 1..204 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:45 Download gff for UFO05194.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 739711..740014 539..841 99 <- Minus
arm_2L 740357..740690 205..538 100 <- Minus
arm_2L 740800..741005 1..204 97   Minus