UFO05203.5prime Sequence
1170 bp (1027 high quality bases) assembled on 2009-07-06
> UFO05203.5prime
CAGTCGACATGGGCCAGACTTCCAGTCACCGGCAGATGCACCACAGTAGC
AATAACAACAACAAGGAGGAACCACCACAACCGGCTTCACAGTTTGGAAA
TCGTCGAACCTCTACCCGCAAATCGACTTCGTCTTCGAAACATTACCCCA
CATTGGTGCAACCATTGCGTAAGGATGAGCTCTCTCTCCTGCGAGATTCA
CTTCTGCGCAATGGAAGCATTATGCGCAAGAACCCGGAACGTCGTCCGGT
AACGATCAGTGAGCTGAAACCAGTTAATACCGGGCAGGGGACTTCGGGTA
GTGTCCTGCCTATTACAGCAGAGGATGCTGCTGGTGGGAGCAGTAGTAGC
ATCACCCAACTAATGGCCTTCCAACTGCCCGTGGATCGAAGTGCCAAGAC
TGACGACCTGGCTGCCGAATCCTCGGCTTCAGCAGCAGCAGCTGTGGCGC
CCAAGGAGGGGCGCAATGAGTTTTATATTGTGGGAGATGGCTATCATCGG
ACGGATCACTGCTACTATCGCAGTCCCAATGGCGATTTTCACAAACTGCC
ATCCGACTCCTTTCACAAGATGTCGGAGGGCTGTTTCGTCCGAATGGCCG
ATGGGGTCTTCCGTCGCCTGGAGGTACCCACCAAGGCTCAAATATCCCGA
AGATCCAGCAGGGCAGAGGAAATAGGCGATGCCACAAGCCAGGGAAATGG
AAGTGCCGCCACCAATGTTAAGAGCCAACTGATGAGATTTCTAAAGCGCT
CCAAGAGCCACACGCCCGCCACTATTGCCAAGTTGCAGCGGGAAAAGGAG
GAGGCCCGAGCGGAACGCAAGCAACGGCTATCGAACGCCCTGCGGCAGAA
GATCTAGCGGCCACAAATGCAGCCTCAGCTGCGGCGGCGAACTCATCCTA
CGCAAGCGGTGGTGGTGGTGGCACCGTAAGCAGTCGAACAATAAGATTGT
GGTGACAATGATCGAAAACGCGGCTTGCCCATTGTGGCACCAGTAAGGCG
GAAAGGCCCAAGCAAGAGTCGCATCATCAGTGACAAGCTCGCACTCGAGG
AATTTTGTAACCCACATGCAAGCTTCTAGAACATCGTTGGCGCGGCCCAG
GTATGGCTAATCTACCTACCAACCAATCCAACTAGCTAGGAATCTGGCTG
AACTTGCTGATTCACAATAA
UFO05203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| par-1-RQ | 3321 | CG8201-RQ | 610..1676 | 8..1063 | 5040 | 98.8 | Plus |
| par-1-RH | 4868 | CG8201-RH | 474..1527 | 8..1050 | 5005 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19464641..19465649 | 8..1012 | 4845 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:52:58 has no hits.
UFO05203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:01 Download gff for
UFO05203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 569..1614 | 1..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:14 Download gff for
UFO05203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 603..1648 | 1..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:45 Download gff for
UFO05203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| par-1-RQ | 603..1648 | 1..1037 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:45 Download gff for
UFO05203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19464634..19465679 | 1..1037 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:14 Download gff for
UFO05203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15352139..15353184 | 1..1037 | 98 | | Plus |
