UFO05207.5prime Sequence
1124 bp (1008 high quality bases) assembled on 2009-07-06
> UFO05207.5prime
CAGTCGACATGAGCAGATCCCTGTTTCTAATTCTTTTATTGGGAATCTCC
TGCCTGGAGATTTTCCAGGCTCGCTCTCTTCTGGAGGGGAGAAAACAAAG
ATTTGTGCGCAGACGCATATCACCCGACGATCCTGATCTCGAGATCATCG
AGGTCAAGGACGTCTACTACCGAAAGCGGCCCAAGAAGTTGGTTGTCCAG
CTCGATGATGACGAATTAAACTGGAAAATTCGCTGTGACTTCGATCCAAG
CAATCCGGAGTGTGGAGATGTAGTGAAGAAACCCGTGGCTCCTATCAGGC
CAACCACAACCACCAACCCCACCACAACCACTAGCAGAACCACCACCACC
ACCACAACTGAACCCACAACAGAACCCACAACTGAACCCACAACTGAACC
CACAACTGAACCCACAACTGAACCCACAACTGAACCTACAACTGAACCGA
CAGAAGCACCAGATACAGATGATAATATCGAATTGTTCGGCGACAATGAA
GAGGACTCTGAGGATCAGGAGGATCTAGATGATCAAGGAGATCAGGAGTA
TCAGGAGGTTGACCCCTATGGCACTTACGATAGCCAAATCCACTCAATTG
GGGCTAATGATGACGGCAACTGGAATGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGAAGCCATCACAAACGGCATGATGACCTG
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTGCCATGTT
GAAACGGGGCGAGAGTGTCCATATGCCCCGTTTAATCAAACTGTGAAACT
CACCCAGGAATGCCTGAACGAAACATTCTCATAACCTTTAGGAATGCAGT
TTCACGTAACCGCCCAACTCTGCC
UFO05207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1468-RA | 735 | CG1468-RA | 23..640 | 9..626 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9878820..9879184 | 262..626 | 1825 | 100 | Plus |
| X | 23542271 | X | 9878444..9878698 | 9..263 | 1275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:08 has no hits.
UFO05207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:05 Download gff for
UFO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 16..640 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:35 Download gff for
UFO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 16..640 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:21 Download gff for
UFO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1468-RA | 16..640 | 1..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:21 Download gff for
UFO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9878437..9878696 | 1..261 | 98 | -> | Plus |
| X | 9878820..9879184 | 262..626 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:35 Download gff for
UFO05207.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9772470..9772729 | 1..261 | 98 | -> | Plus |
| arm_X | 9772853..9773217 | 262..626 | 100 | == | Plus |
