UFO05214.5prime Sequence
1146 bp (1011 high quality bases) assembled on 2009-07-06
> UFO05214.5prime
CAGTCGACATGGCTGATCCCCGTCGTCGTTTCCGTAACAAAAAGCGGGAT
GAAGCCTGCTCCGGCCTCCTGGCACCCGTGACCATCGCCCGGCGCGAGGA
CGCCGCCCGCATGATGCAGCCAAAAATTCTGCTAAAGAAGGATCGCGATC
GGGAGCAAGAGACCTGGGACAGAGAGCGGGACAAGGATAGGAAGCTGGAG
AGGGACAGGGAGGCGGAGCCAAGTCCCAGTTGTTACCCCGATACACCGCC
GGCCCTCAAAACGATGATCGTCAATCGTACGGGTGAGGTGCGGCCTGCAG
ACAGATGCCAGATGCCTTTGGCCGGAGGTGCTCTTGTCCAGGGAAGCGGG
CAATTGTCCGCCGTGCCATCCAGCTCCGTTTGCGCCGCATTGGTTAGCTC
GGTACCAACTAGCAGGGACAAGGGGAGCTGCAGTGGTGGTGCCGGAACAG
CTGGCACCTCGGCCGGAGCACCGAATGCTCTCCAGGAGCTGCAGCCGCCA
CGCATGAACCGTCCCACACCCCTAATCGTGGCCAATGGTATTTTTAATGC
CAATGCCCGCAAGCTCTTCCACAAAACCAATACGGACTTCACCGTAATCG
GGGTCCTGGGTGGTCAGAGTTCCGGAAAAAGCACGCTGCTCAATCTTCTG
GCCGCAGAGCGGTCCCTGGACTACGACTACTATCAACATCTATTCTCTCC
AGAGGCGGATGAATGCATCTTTGCCACGCGTCACAAGTTGAAGCCGACAA
TGGGCAGAAGAGCATTTTGCGTCCTCGCACGGAAACCCTGCAGTTTTTAT
CACCCGGGAACGTCACATACTGCTGGACACACCACCGTTAATGCCTGTAG
GCAAGGACTCGGATCACCAGGATCTTTACTCCCTGGGCACCATGGCGCAA
CTGTTGAGTGTATGCCATATATTAATTTTAGTCATCGATGGCTTGGCCTT
GAACATGCGTCTGATACGCTGCCCTTCGCCTGAAACGACGCTTCATGCAA
GGCTATGTACGGATCCATGCGCAGTAGTATCGTCCGCCGCGCCGTGCCAT
CGAATAGACTTTGAAAAACAGCACCGGGACCGACTGGACAAAGTGGCCCT
CCTTATACGGCGCACGGGGCTGCCTATACTGGAAAGGCAATGCCCC
UFO05214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3857-RA | 2341 | CG3857-RA | 87..1223 | 9..1128 | 5035 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1938857..1939954 | 1092..9 | 4640 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:06 has no hits.
UFO05214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:10 Download gff for
UFO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 47..1160 | 1..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:30 Download gff for
UFO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 80..1193 | 1..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:11 Download gff for
UFO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3857-RA | 80..1193 | 1..1098 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:11 Download gff for
UFO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1938848..1939958 | 1..1098 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:30 Download gff for
UFO05214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1832881..1833991 | 1..1098 | 97 | | Minus |
