UFO05221.5prime Sequence
1125 bp (1015 high quality bases) assembled on 2009-07-06
> UFO05221.5prime
CAGTCGACATGTCTCTGGTGCCTACCACATATCGCGATTTGTCGCGCGAA
TTTGATCGACTCCGTCCGCTCTACCATCCGCCGTATGATTTCCAGCTATA
TCCGTATCTGTGGGACGATTCGCGTCTCTGGTGGCCATCGCCTCACACCA
GCAGAAGTGACCTACTCCGACCTCTGGATGAGCTGGTGTCGCGTCGAGTG
CGCAACCAGTTGATCCAATCGACGCCGTATGAGTGGGCGCATCCAATGAG
GTGGGACAACTACTATTCCGGTGAGCGTGTCCATGTGGATGAGAAGGGAT
TTCGGATTGACATCGATGTGCGACAATTTCATCCCCACGACATTGTGGTC
AAAACCAATGACGACTATGTCATCGTCCAGGGAAATCACAATCGTCGCGA
CGAGGGTTCCAATGGCCTGGTGGAGCGGCACTTTGTGAGGAAGTACCTTC
TGCCCCGCGGATACAATGCCAATGAGGTAATCTCGGACATATCCAGCGAT
GGCATCCTCACCATCAAGGCTCCACCACCGCCGCCAGCCAAGTACTACAC
GCCCGGAGAGAGATTGGTCCGCGTTCATGAAACCGGAAAGCTGGCCCTGC
CCTGGAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAG
CACTTGTCGCTTGCGTATAATATTTGCCATGGTGAAACGGGGGGGCGAAG
AAGTTGTCATATTGGCCACGTTTAATCAAACTGGGTGAAACTCACCAGGG
ATGCTGAAACGAAAAAAATATTCTCATAACCTTAAGGAAAGCCAGTACGT
ACGCCAACTGGCAATATGTGGTGAA
UFO05221.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4461-RA | 864 | CG4461-RA | 55..654 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9375484..9376083 | 9..608 | 3000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:38 has no hits.
UFO05221.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:15 Download gff for
UFO05221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4461-RA | 50..655 | 1..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:50 Download gff for
UFO05221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4461-RA | 49..654 | 1..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:02 Download gff for
UFO05221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4461-RA | 49..654 | 1..608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:02 Download gff for
UFO05221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9375478..9376083 | 1..608 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:50 Download gff for
UFO05221.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9368578..9369183 | 1..608 | 99 | == | Plus |
