UFO05223.5prime Sequence
1081 bp (990 high quality bases) assembled on 2009-07-06
> UFO05223.5prime
CAGTCGACATGAAGTTCTTCGTTCTCGTGGCTATCGCTTTTGCTCTGCTT
GCTTGCGTGGCGCAGGCTCAGCCAGTTTCCGATGTGGATCCAATTCCAGA
GGATCATGTCCTGGTGCATGAGGATGCCCACCAGGAGGTGCTGCAGCATA
GCCGCCAGAAGCGAGCCACATGCGACCTACTCTCCAAGTGGAACTGGAAC
CACACCGCCTGCGCCGGCCACTGCATTGCCAAGGGGTTCAAAGGCGGCTA
CTGCAACGACAAGGCCGTCTGCGTTTGCCGCAATGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGT
GCTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACG
GTGTACAGGGTGACACTATCCCATATCACAGCTCACGTCTTTCATTGCCA
TACGAAATCGGATGAGCATTCATCAGCGGCAGATGTGATAAGCGATAAAC
TGTGCTTATTTTTTCCTTACGTCTTTAAAGCGTAATAATCCAGCTGACGA
CTGCTAAGTACATTGGACACTGACTGAATGC
UFO05223.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Def-RA | 399 | CG1385-RA | 10..285 | 9..284 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10054292..10054567 | 284..9 | 1380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:55:35 has no hits.
UFO05223.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:07 Download gff for
UFO05223.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 1..279 | 9..287 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:54 Download gff for
UFO05223.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 10..285 | 9..284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:58 Download gff for
UFO05223.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Def-RA | 10..285 | 9..284 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:44:58 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:44:54 has no hits.
