UFO05224.5prime Sequence
1115 bp (971 high quality bases) assembled on 2010-12-10
> UFO05224.5prime
CAGTCGACATGAAGTTCACCCTATTCTGTATTGCTCTGGCAGCTTTTTTG
TCCATGGGACAGTGTAATCCGGACTTTCGCCAAATAATGCAACAGTGCAT
GGAGACCAACCAAGTGACCGAGGCTGATCTCAAGGAGTTCATGGCCAGCG
GGATGCAGAGCAGTGCCAAGGAGAACCTCAAGTGCTACACCAAGTGCCTG
ATGGAGAAGCAGGGTCATCTCACCAATGGCCAGTTCAATGCTCAGGCTAT
GCTCGACACTCTCAAAAATGTGCCTCAGATCAAGGACAAAATGGACGAGA
TTTCCTCGGGAGTGAATGCCTGCAAGGACATCAAGGGAACCAACGATTGC
GACACGGCCTTTAAGGTTACCATGTGCCTGAAGGAGCACAAGGCCATTCC
AGGACATCACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGC
ATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGG
GGCGAAGAAGTTGTCCATATTGGCCCACGTTTAAATCAAAACTGGTGAAA
CTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTTTA
GGGAAATAGGCCAGGGTTTTCACCGTACACGCACATCTTGCGAATATATG
TGTAGAAACTGCGGAAATCGTCGTGGTATTCACCTCCAGAGCGATGAAAC
GTTCAGTTGCTCATCAAAACGTGTAACAGGGTGAAACACTATCCATATCA
CAGCTCACCGTCTTCATGGCCAACGATCGGATGACCATCATCAGGCGGCA
GAATTGTGTAAATAA
UFO05224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56h-RB | 495 | CG13874-RB | 24..425 | 9..410 | 2010 | 100 | Plus |
| Obp56h-RA | 593 | CG13874-RA | 24..425 | 9..410 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19815687..19816036 | 61..410 | 1750 | 100 | Plus |
| 2R | 25286936 | 2R | 19815577..19815630 | 9..62 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:17:36 has no hits.
UFO05224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:15 Download gff for
UFO05224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RB | 17..428 | 1..414 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:10 Download gff for
UFO05224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RA | 17..428 | 1..414 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:12 Download gff for
UFO05224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56h-RA | 17..428 | 1..414 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:12 Download gff for
UFO05224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19815570..19815630 | 1..62 | 93 | -> | Plus |
| 2R | 19815689..19816036 | 63..410 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:10 Download gff for
UFO05224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15703075..15703135 | 1..62 | 93 | -> | Plus |
| arm_2R | 15703194..15703541 | 63..410 | 100 | == | Plus |
