UFO05225.5prime Sequence
1122 bp (1023 high quality bases) assembled on 2009-07-06
> UFO05225.5prime
CAGTCGACATGACGTCCATTGCGGGAGGCCACGGCGAGGCGAATCCAAAC
AGCTCCTGGCTGAGTGCCCGGGGATTTTGGCTAGCATACCTCCTGGGCCT
GCTGTCGGTGCACCTGCTCTTCTTATCAGTGCCCTTCGTTAGCATTCCAT
GGGCCTGGACGGCTACCAACCTGCTTCACAATGCAGCCCACCTGTACTTT
CTGCACGTCATCAAGGGCGCTCCCTGGCTCAGCACGGAGAACGATCCCAG
CCGGCGTTGGACGCACTGGGAACAGATCGATGACGGGGTACAGATGACCA
CAACGCGCAAGTTCCTCACAGCTGTTCCCATTGTTCTTTTCCTACTTACC
TGTCTGTACACCCGAAACAACACGGAACACTTTATCCCAAACTTTATATC
CCTGGTGGTCGTCACGCTTCCCAAGCTGCCGCAGTTCCACGGCGTGCGGC
TGTTCAACATTAACAAGTACGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATCTCATAAA
CCCTTTAGGAAATAGCCAGGTTTCACCGTAACACGCCACATCTGCGAATA
TATTGTGTAGAACTGCGGAAATCGTCTGTATTCACTCCAGACGATGGAAA
CGCTCAGTGCTCATGGAAACGGTTAGACAGCTGAACTATCAATACACAGC
CACGCTTTCATGCATCGAATCC
UFO05225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ORMDL-RA | 674 | CG14577-RA | 79..542 | 7..470 | 2305 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21635383..21635562 | 7..186 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 21635618..21635769 | 186..337 | 745 | 99.3 | Plus |
| 3L | 28110227 | 3L | 21635987..21636119 | 338..470 | 665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:32:15 has no hits.
UFO05225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:18 Download gff for
UFO05225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 1..465 | 9..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:37 Download gff for
UFO05225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 74..550 | 1..481 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:17 Download gff for
UFO05225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ORMDL-RA | 74..550 | 1..481 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:17 Download gff for
UFO05225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21635378..21635561 | 1..185 | 98 | -> | Plus |
| 3L | 21635618..21635769 | 186..337 | 99 | -> | Plus |
| 3L | 21635987..21636119 | 338..470 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:37 Download gff for
UFO05225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21628478..21628661 | 1..185 | 98 | -> | Plus |
| arm_3L | 21628718..21628869 | 186..337 | 99 | -> | Plus |
| arm_3L | 21629087..21629219 | 338..470 | 100 | == | Plus |
