UFO05227.5prime Sequence
1149 bp (1023 high quality bases) assembled on 2009-07-06
> UFO05227.5prime
CAGTCGACATGCTCCTCCACTGGCTTGTTCTGGTCGCCAGCGTCACCCTG
ATCTCGGCAGGATCTTCTCCGGAGCGAATAGTGGGTGGCCACCCTGTGCT
TATTTCAGAAGTTCCTTGGCAGGCGGCTCTCATGTATTCGGAAAAATACA
TTTGCGGTGCAGTTATCTACAGTGACAAGATCATTATAACAGCAGCCCAC
TGTGTTGAAAGACCCTTCGATACACTGTATTCCGTCAGAGTTGGATCCGT
ATGGAAAAACTTGGGTGGACAGCACGCCAGGGTTGCTGTAATTCGGAAGC
ATGAAGACTACGTATCTTCCACCATTTTGTTCAACGATATAGCCGTAATT
AGACTGGTGGACACTCTAATTTTCAATGCCGAAGTAAGACCTATCCAACT
GGCCGATAGTGCACCCGCAGCTGGAACTGAAGCTTCGGTTTCTGGTTGGG
GAGAAATCGGAATCCTCTGGCTACAACCTACATCTCTATTGAAAACCTCA
GTGAAAATACTAGACCCGAATGTTTGTAAGCGGTCCTATCAGTACATCAC
CAAAACTATGATTTGCGCCGCCGCTCTCTTAAAAGATTCCTGTCATGGAG
ACTCCGGCGGACCTCTCGTCTCCGGTGGCCAACTAGTTGGCATTGTCTCC
TACGGCATTGGATGCGCCAATCCGTTCTTTCCCGGAGTCTACGCCAATGT
GGCTGAGCTGAAACCTTGGATCTTAAATGCTATTGAACAGCTTGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAATCCAGATGGAGTTCTGAGTCATTACTGATCTATCAACAGAG
TCAGCGAGCTCGATATCAATTACGCCCCGCCTGCCACTCATCGCAGTACT
GTGTATCATTAGCATTCTGCGACATGAGCCATCACAACGCATGATGACCT
GATCGCCAGCGCATCAGCACTTGTCGCTGCGTTATATATTGCATGTGAAA
CCGGGGGCGAAGACTGTCTATTGCAGTTATCAACTGGTAACTACAGATG
UFO05227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ser12-RA | 845 | CG17240-RA | 6..740 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2250536..2251270 | 743..9 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:55:41 has no hits.
UFO05227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:20 Download gff for
UFO05227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..738 | 9..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:59 Download gff for
UFO05227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..744 | 4..748 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:01 Download gff for
UFO05227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ser12-RA | 1..744 | 4..748 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:01 Download gff for
UFO05227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2250532..2251274 | 1..748 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:59 Download gff for
UFO05227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2250532..2251274 | 1..748 | 99 | | Minus |
