UFO05228.5prime Sequence
1144 bp (1033 high quality bases) assembled on 2009-07-06
> UFO05228.5prime
CAGTCGACATGTCGTCGACAAATGAAACCAACCAAGTGCTGCAGCGCCTG
AACAGCCTGAAAATCGTGGAAACCCCAAAGGAGCAGCATGAGTTCGGAAA
ACGCGAGTGCTACTCCCTGGACAGCAAGAAGTATTCCCTGGTACCAGCCA
CCCCCAGCAGCTCAGGACACGGAAAGTTCCAAACCGAACTCAAAAAGCGC
CGCAAAAACAAACTGAATCGCATGTACACTTACGAGGCTGATAAGAATTT
CATCAAGGCTCGCAAATCTTTGAACTTCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC
CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATT
CACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAA
CAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCATA
CGAAATTCCGGATGAGCATTCATCAGCGGGCAGATGGTGATAAGGCCGGA
TAAACTTGTGCTTTTTTTCTTACGGTCTTTAAAAGGCGTAATATCAGCTG
ACACTGGTTAAGGTAATTGGAGCACTGACTGAATGCCTCAAATGTTCTTA
CGATGCATTGGATATCACGGGGTATCATGATTTTTTCCATAGTC
UFO05228.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Z600-RA | 453 | CG17962-RA | 64..333 | 9..278 | 1350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15509124..15509393 | 9..278 | 1350 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:53:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 847..914 | 123 | 68.1 | Plus |
UFO05228.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:21 Download gff for
UFO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 1..282 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:18 Download gff for
UFO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 1..282 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:49 Download gff for
UFO05228.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Z600-RA | 56..336 | 1..282 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:41:49 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:17:18 has no hits.
