UFO05238.5prime Sequence
1145 bp (1014 high quality bases) assembled on 2009-07-06
> UFO05238.5prime
CAGTCGACATGCAGTCTACTCCAATCATTCTGGTGGCAATCGTCCTTCTC
GGCGCCGCACTGGTGCGAGCCTTTGACGAGAAGGAGGCCCTGGCCAAGCT
GATGGAGTCAGCCGAGAGCTGCATGCCGGAAGTGGGGGCCACCGATGCCG
ATCTGCAGGAAATGGTCAAGAAGCAGCCAGCCAGCACATATGCCGGCAAG
TGCCTGCGCGCCTGCGTGATGAAGAACATCGGAATTCTGGACGCCAACGG
AAAACTGGACACGGAGGCAGGTCACGAGAAGGCCAAGCAGTACACGGGCA
ACGATCCGGCCAAGCTAAAGATTGCCCTGGAGATCGGCGACACCTGTGCC
GCCATCACTGTGCCGGATGATCACTGCGAGGCCGCCGAAGCCTATGGCAC
TTGCTTCAGGGGCGAGGCCAAGAAACATGGACTCTTGGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
ACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACG
GCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGT
ATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGG
CCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACG
AAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGGTTTCACCGTA
CACGCCACATCTTGCGATATATGTGTAGAACTGCGGAAATCGTCGTGTAT
TCACTCCAGAGCGATGACACGTTCAGTTGCCTCATGAAAACGGTGTACAG
GTGAACACTATCCCATATCACCGCTCACGTCTTTCATTGCCAACGAATTT
CGGAATGACATCATCAGGCGGCAGAATGTGCAATAAGGCGGAATA
UFO05238.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp28a-RA | 575 | CG6641-RA | 36..465 | 8..437 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7496901..7497330 | 437..8 | 2150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:24 has no hits.
UFO05238.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:35 Download gff for
UFO05238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbprp5-RA | 24..468 | 1..446 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:40 Download gff for
UFO05238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp28a-RA | 29..473 | 1..446 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:53 Download gff for
UFO05238.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp28a-RA | 29..473 | 1..446 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:40:53 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:23:40 has no hits.
